An easy python package to run quick basic QA evaluations. This package includes standardized QA evaluation metrics and semantic evaluation metrics: Black-box and Open-Source large language model prompting and evaluation, exact match, F1 Score, PEDANT semantic match, transformer match. Our package also supports prompting OPENAI and Anthropic API.

GenStore is the first in-storage processing system designed for genome sequence analysis that greatly reduces both data movement and computational overheads of genome sequence analysis by exploiting low-cost and accurate in-storage filters. Described in the ASPLOS 2022 paper by Mansouri Ghiasi et al. at https://people.inf.ethz.ch/omutlu/pub/GenS…

Quantitative metagenomic alignment and taxonomic exact-matching

Bioinformatics algorithms for DNA pattern searching

This repository hosts the CSVTU GPT app, a Streamlit-based interactive application designed to provide efficient access to subject-specific academic information and resources. It supports functionalities like fuzzy matching, exact word matching, and syllabus search capabilities, enabling users to query data conveniently.