Hierarchical probabilistic models for multiple gene/variant associations based on NGS data

R/lineup package to detect sample mix-ups between two sets of measurements

Bioinformatic software to identify causal variants in GWAS and GWAS/eQTL studies.

analysis for UCSF BMI 206 based on Hormozdiari et al (2016) Am J Hum Genet

Multi-Tissue eQTL

fastQTL analysis of methylation and expression data

An Online Database of 3D Chromatin Structure

Whole bone eQTL and GWAS enrichment analysis

An R package for multivariate adaptive shrinkage.

Hidden Markov Random Field Model - Inferring Gene-Disease Association by an Integrative Analysis of eQTL GWAS and Protein-Protein Interaction data

Code and raw data used in the analyses for: Trans-acting genetic variation affects the expression of adjacent genes via horizontal mechanisms.

client to the cimr-d database for continuous integration and analysis using cimr

Script and pipeline for BRAINcode project

GTEx eQTL analysis

Analysis of regulatory impacts of autism-associated SNPs on biological pathways in the fetal and adult cortex.

Tejaas - a tool for discovering trans-eQTLs

Pipeline to investigate multimorbidity of complex traits/phenotypes by integrating chromatin interaction and expression quantitative trait loci data.

Analysis of host regulatory networks that could be impacted upon infection with the Covid-19 virus