A Python parser for the BRENDA database
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Sep 15, 2023 - Python
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enzyme
Here are 20 public repositories matching this topic...
Python package for modelling enzyme reactions using Monte carlo sampling from parameter distributions
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Jul 15, 2025 - Python
EnzyMM - Enzyme Motif Miner - Geometric matching of catalytic motifs in protein structures.
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Nov 26, 2025 - Python
A spatially explicit trait- and individual-based microbial systems modelling framework
enzyme genome biology trait decomposition microbiome fungi bacteria omics ecology community-ecology fungus soil microorganism individual-based-modelling litter tradeoff dement dementpy trait-based-modelling
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Nov 12, 2025 - Python
Computing Protein Electric Field Topology in python, built for high-throughput accelerated calculations
enzyme molecular-dynamics computational-chemistry electrostatics simulation-analysis enzyme-catalysis electric-field
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Oct 23, 2025 - Python
The code from the paper "An automated protocol for modelling peptide substrates to proteases"
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Aug 5, 2021 - Python
🌈 chromhandler is a Python package designed to streamline the processing and analysis of chromatographic data, enabling efficient metadata enrichment and conversion to EnzymeML format for further analysis.
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Oct 28, 2025 - Python
Predict enzymatic impact on biogeochemical cycles from proteomes.
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Nov 27, 2025 - Python
Trim, extract, and convert GEMs
csv enzyme extract gml trim dot phenotype filtering graphml sbml metabolic-network genome-scale-models subnetwork
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Jun 8, 2021 - Python
A tool for protein mutation effect prediction.
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Sep 20, 2021 - Python
Fit enzymatic kinetics data set directly from excel with the Michaelis-Menten equation
enzyme velocity fitting curve-fitting practical teaching-materials michaelis-menten micahelis-constante micahelis-menten-curve-fitting
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Nov 22, 2025 - Python
Genome scAle Substrate Specific Enzyme pRediction
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Mar 5, 2023 - Python
Simple Vmax and Km calculator for enzyme reactivity.
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Oct 27, 2022 - Python
The CAVER PyMOL for modern PyMOL(^v2.5, ^v3.02; PyQt) using Caver 3.02 software.
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Jul 24, 2025 - Python
Python script for enzyme sequence clustering and metabolic pathway comparison.
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Nov 18, 2025 - Python
Extract data obtained from the iodine assay (multiple time points and samples) using a questionaire
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May 12, 2023 - Python
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