Awesome List of Digital and Computational Pathology Resources

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

The official repo of PuzzleTuning: Explicitly Bridge Pathological and Natural Image with Puzzles (arXiv: 2311.06712)

🚀 H2G-Net: Segmentation of breast cancer region from whole slide images

Machine learning tool for analysis of lung adenocarcinoma tumors

Tile Serving on the web without a server

Web-based Digital Pathology Viewer

Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for deep learning purposes.

cuCIM - RAPIDS GPU-accelerated image processing library

Modularized and scalable whole slide image analysis

Tools for computational pathology

A collection of groovy scripts for digital pathology

QuPath - Open-source bioimage analysis for research

xMIL: Insightful Explanations for Multiple Instance Learning in Histopathology

Python library for reading tiles from wsi tiff-files.

Interoperable web-based slide microscopy viewer and annotation tool

PathoPatcher is a Python project designed for accelerating Whole Slide Image Preprocessing, employing AI-based preprocessing techniques with features like annotation handling, color normalization, and configurable parameters

Library for Digital Pathology Image Processing

Efficient data structures and IO for whole slide images analysis

Digital pathology image viewer with support for human/machine generated annotations and markups.