DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
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Updated
Sep 11, 2024 - Python
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Scalable and High Performance Variant Calling on Cluster Environments
Joint variant calling with GATK4 HaplotypeCaller, Google DeepVariant 1.0.0 and Strelka2, coordinated via Snakemake.
A Snakemake workflow for variant calling with DeepVariant, and optionally joint variant calling using GLnexus.
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