CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data
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May 7, 2025 - Python
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contamination-detection
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Python package to calculate various sample contamination metrics.
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Apr 24, 2025 - Python
Epidemic Modeling Study: This study analyzes with Linear Algebra the progression of disease contagion within a population. Covid-19 Dashboard: We have created an interactive dashboard to analyze the data on the behavior of the Coronavirus in Brazil. The project is powered by a public CSV dataset.
python dashboard linear-algebra disease-spread sir-model contamination-detection disease-prediction covid19-data
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Mar 25, 2025 - Python
In this repository I backup the pipelines I write for the project I am involved
plots tas variant-calling wgs snv purity cnv wes dna-sequencing contamination-detection structural-variants vaf
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Jan 19, 2025 - Python
luftdaten script for raspberry with enviro+
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Apr 20, 2020 - Python
Detect and quantify plasmid DNA contamination in sequencing data
bioinformatics genomics next-generation-sequencing plasmid contamination-detection minimap2 splicing
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Jan 20, 2025 - Python
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