Python package that uses colorspace-based segmentation to analyze histopathology images.
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Feb 7, 2024 - Python
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collagen
Here are 5 public repositories matching this topic...
Intelligent System for Analysis, Model Building And Rational Design.
python api bioinformatics analysis structural-biology pypi computational-biology modelling bristol protein-design coiled-coil collagen
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Apr 20, 2018 - Python
A python package to analyze the matrix fiber orientation and intensity around cells in fiber matrices (as a proxy for cellular forces).
fibers image-processing tfm orientation ecm microscopy imaging collagen cell-mechanics fibrosis traction-force-microscopy contractility mechanobiology
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Jan 17, 2025 - Python
A Python package to conduct 3D Traction Force Microscopy on multicellular aggregates (spheroids).
finite-elements biophysics particle-image-velocimetry collagen traction-force-microscopy material-simulation multicellular-aggregates spheroid
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Dec 16, 2024 - Python
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