VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.
Python package for creating interactive and static visualizations of multi-omics data
Batch Effect Correction framework for metagenomic data
DNA mutation clustering tool for fast detection of likely false-negative DNA variants and likely related mutants in a sequenced population of independently mutagenized individuals. Other uses include analysis of segregating mutants and the detection of problematic samples in a sequenced population.
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