'Principles of Spatial Transcriptomics Analysis with Bioconductor' book
-
Updated
Sep 27, 2024 - TeX
'Principles of Spatial Transcriptomics Analysis with Bioconductor' book
Supplementary R packages utils
Docker Containers for Bioconductor - NEW!
Bioconductor teaching and education committee
Low level infrastructure to handle MS spectra
GoiStrat - A novel supervised approach to gene of interest based sample stratification and analysis to assess biological differences
Provide R access to the NCI Genomic Data Commons portal.
📦 Omics Data Analysis Tools
tidy processing of biological sequences in R
interactive force-directed graph layouts within RStudio
Professional resume, portfolio, bio, and presentations for Sean K. Maden, Ph.D.
Interactive Differential Expression AnaLysis - DE made accessible and reproducible
pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
Continuous integration for R packages. 🔀 Automates testing ✅, documentation website building 📦, & containerised deployment 🐳.
Single-cell RNAseq materials derived from the 2023 ISMB OSCA workshop in the carpentries workbench format.
Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.
Development repository for the Bioconductor package 'mixOmics '
Add a description, image, and links to the bioconductor topic page so that developers can more easily learn about it.
To associate your repository with the bioconductor topic, visit your repo's landing page and select "manage topics."