Scalable RNA-seq analysis

🪱 PARASITE || A parallel sentence data preprocessing toolkit. Originally developed as a part of the `en-ru` winner submission of WMT20 Biomedical Translation Task.

Software tools to collect Coronavirus sequences and create protein and nucleotide HMMs

Python code to compute adatper content in reads, kmer content, per-base-GC content (at a specific position in a read alignment, against reference genome), per base NC content (at a specific position in a read alignment against the reference genome), per base seq quality (across aligned reads), per base sequence content, per base quality scores, …

Genome read alignments visualizer

Evaluating the consistency of molecular diagnostic characters (signature characters) detected by DeSignate.

dna/rna alignment classifier

Homework Solutions for Introduction to Bioinformatics Course as Computer Science B.Sc. Student at Department of Computer Engineering, Sharif University of Technology

Files pertaining to the processing of NGS data in .fasta.gz format for the purposes of identifying the genomic sequences which belong to either of the tuataras dual mitochondrial genomes.

This is an App that allows You to perform some task on the Bioinformatics field.

This is a project to contribute utilities for ViruSurf, a viral db centered in viral sequences.