Fast and accurate tool for estimating genomic distances between genome-skims
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Sep 28, 2023 - Python
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alignment-free
Here are 12 public repositories matching this topic...
Deep learning based alignment-free method for protein family modeling and prediction
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Jul 31, 2018 - Python
Alignment-Free RGBT Salient Object Detection: Semantics-guided Asymmetric Correlation Network and A Unified Benchmark
transformer alignment attention sod alignment-free salient-object-detection saliency-detection multimodal rgbd-sod rgbd-saliency-detection rgbt-sod rgbd-salient-object-detection rgbt-salient-object-detection rgbt-saliency-detection
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Dec 27, 2024 - Python
Alignment-free method to identify and analyse discriminant genomic subsequences within pathogen sequences
machine-learning svm feature-extraction alignment-free castor taxonomic-classification kmers rfe virus-classification castor-krfe svm-rfe
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Feb 26, 2023 - Python
Extract SNPs and accessory differences in closely related bacterial genomes from k-mers
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Jan 6, 2024 - Python
A neural network for alignment-free, kingdom-level classification of eDNA
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Apr 19, 2022 - Python
An ensemble method for predicting transcription factor in protein sequences
bioinformatics transcription-factors machine-learning-algorithms blast alignment-free hybrid-approach
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Jul 25, 2024 - Python
Alignment-free bacterial identification and classification in metagenomics sequencing data using machine learning
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Dec 11, 2024 - Python
Scorpio: Advancing Embeddings for Superior Biological Sequence Analysis
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Dec 24, 2024 - Python
An alignment-free deep-learning model trained to classify human gut bacteria
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Mar 16, 2022 - Python
[Features extraction method] You can find the new version of CASTOR_KRFE at https://github.com/bioinfoUQAM/CASTOR_KRFE
svm alignment-free castor taxonomic-classification kmers rfe virus-classification kmer-extraction castor-krfe svm-rfe
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Jul 3, 2020 - Python
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