Missing pickle file

[mnshgl0110]

Hi,
I am trying to run cutesv on human HG002 genome. But I am getting the missing pickle file error:
FileNotFoundError: [Errno 2] No such file or directory: 'hg002/results/KMT2C_chr13_10688343_10754814.pickle'
cutesv.log
Based on the suggestions here, I have tried conda as well as git install. Further, I also tried different number to threads (from here), but that did not work either.
Any suggestions, how can I make it work?

[Meltpinkg]

Hello, @mnshgl0110

This may caused by the reference used in the read alignment not equaling the reference used in running cuteSV. Please ensure the reference chromosomes in the read alignment and SV calling is the same.
Hope it will help!

Best,
Shuqi