Closed
Description
I'm relatively reliably being able to replicate the following warnings on Julia v1.10.1:
julia> using Plots
│ Package Plots not found, but a package named Plots is available from a registry.
│ Install package?
│ (@v1.10) pkg> add Plots
└ Select environment:
> 1: `/tmp/jl_lMloNq` (/tmp/jl_lMloNq)
2: `~/.julia/environments/v1.10/Project.toml` (@v#.#)
Resolving package versions...
Updating `/tmp/jl_lMloNq/Project.toml`
[91a5bcdd] + Plots v1.40.1
Updating `/tmp/jl_lMloNq/Manifest.toml`
[d1d4a3ce] + BitFlags v0.1.8
[944b1d66] + CodecZlib v0.7.4
[35d6a980] + ColorSchemes v3.24.0
[3da002f7] + ColorTypes v0.11.4
[c3611d14] + ColorVectorSpace v0.10.0
[5ae59095] + Colors v0.12.10
[34da2185] + Compat v4.12.0
[f0e56b4a] + ConcurrentUtilities v2.3.1
[d38c429a] + Contour v0.6.2
[9a962f9c] + DataAPI v1.16.0
[864edb3b] + DataStructures v0.18.16
[8bb1440f] + DelimitedFiles v1.9.1
[ffbed154] + DocStringExtensions v0.9.3
[460bff9d] + ExceptionUnwrapping v0.1.10
[c87230d0] + FFMPEG v0.4.1
[53c48c17] + FixedPointNumbers v0.8.4
[59287772] + Formatting v0.4.2
[28b8d3ca] + GR v0.73.2
[42e2da0e] + Grisu v1.0.2
[cd3eb016] + HTTP v1.10.1
[92d709cd] + IrrationalConstants v0.2.2
[1019f520] + JLFzf v0.1.7
[692b3bcd] + JLLWrappers v1.5.0
[682c06a0] + JSON v0.21.4
[b964fa9f] + LaTeXStrings v1.3.1
[23fbe1c1] + Latexify v0.16.1
[2ab3a3ac] + LogExpFunctions v0.3.26
[e6f89c97] + LoggingExtras v1.0.3
[1914dd2f] + MacroTools v0.5.13
[739be429] + MbedTLS v1.1.9
[442fdcdd] + Measures v0.3.2
[e1d29d7a] + Missings v1.1.0
[77ba4419] + NaNMath v1.0.2
[4d8831e6] + OpenSSL v1.4.1
[bac558e1] + OrderedCollections v1.6.3
[69de0a69] + Parsers v2.8.1
[b98c9c47] + Pipe v1.3.0
[ccf2f8ad] + PlotThemes v3.1.0
[995b91a9] + PlotUtils v1.4.0
[91a5bcdd] + Plots v1.40.1
[aea7be01] + PrecompileTools v1.2.0
[21216c6a] + Preferences v1.4.1
[3cdcf5f2] + RecipesBase v1.3.4
[01d81517] + RecipesPipeline v0.6.12
[189a3867] + Reexport v1.2.2
[05181044] + RelocatableFolders v1.0.1
[ae029012] + Requires v1.3.0
[6c6a2e73] + Scratch v1.2.1
[992d4aef] + Showoff v1.0.3
[777ac1f9] + SimpleBufferStream v1.1.0
[a2af1166] + SortingAlgorithms v1.2.1
[82ae8749] + StatsAPI v1.7.0
[2913bbd2] + StatsBase v0.34.2
[62fd8b95] + TensorCore v0.1.1
[3bb67fe8] + TranscodingStreams v0.10.3
[5c2747f8] + URIs v1.5.1
[1cfade01] + UnicodeFun v0.4.1
[1986cc42] + Unitful v1.19.0
[45397f5d] + UnitfulLatexify v1.6.3
[41fe7b60] + Unzip v0.2.0
[6e34b625] + Bzip2_jll v1.0.8+1
[83423d85] + Cairo_jll v1.16.1+1
[2702e6a9] + EpollShim_jll v0.0.20230411+0
[2e619515] + Expat_jll v2.5.0+0
[b22a6f82] + FFMPEG_jll v4.4.4+1
[a3f928ae] + Fontconfig_jll v2.13.93+0
[d7e528f0] + FreeType2_jll v2.13.1+0
[559328eb] + FriBidi_jll v1.0.10+0
[0656b61e] + GLFW_jll v3.3.9+0
[d2c73de3] + GR_jll v0.73.2+0
[78b55507] + Gettext_jll v0.21.0+0
[7746bdde] + Glib_jll v2.76.5+0
[3b182d85] + Graphite2_jll v1.3.14+0
[2e76f6c2] + HarfBuzz_jll v2.8.1+1
[aacddb02] + JpegTurbo_jll v3.0.1+0
[c1c5ebd0] + LAME_jll v3.100.1+0
[88015f11] + LERC_jll v3.0.0+1
[1d63c593] + LLVMOpenMP_jll v15.0.7+0
[dd4b983a] + LZO_jll v2.10.1+0
⌅ [e9f186c6] + Libffi_jll v3.2.2+1
[d4300ac3] + Libgcrypt_jll v1.8.7+0
[7e76a0d4] + Libglvnd_jll v1.6.0+0
[7add5ba3] + Libgpg_error_jll v1.42.0+0
[94ce4f54] + Libiconv_jll v1.17.0+0
[4b2f31a3] + Libmount_jll v2.35.0+0
⌅ [89763e89] + Libtiff_jll v4.5.1+1
[38a345b3] + Libuuid_jll v2.36.0+0
[e7412a2a] + Ogg_jll v1.3.5+1
[458c3c95] + OpenSSL_jll v3.0.13+0
[91d4177d] + Opus_jll v1.3.2+0
[30392449] + Pixman_jll v0.42.2+0
[c0090381] + Qt6Base_jll v6.5.3+1
[a44049a8] + Vulkan_Loader_jll v1.3.243+0
[a2964d1f] + Wayland_jll v1.21.0+1
[2381bf8a] + Wayland_protocols_jll v1.31.0+0
[02c8fc9c] + XML2_jll v2.12.2+0
[aed1982a] + XSLT_jll v1.1.34+0
[ffd25f8a] + XZ_jll v5.4.5+0
[f67eecfb] + Xorg_libICE_jll v1.0.10+1
[c834827a] + Xorg_libSM_jll v1.2.3+0
[4f6342f7] + Xorg_libX11_jll v1.8.6+0
[0c0b7dd1] + Xorg_libXau_jll v1.0.11+0
[935fb764] + Xorg_libXcursor_jll v1.2.0+4
[a3789734] + Xorg_libXdmcp_jll v1.1.4+0
[1082639a] + Xorg_libXext_jll v1.3.4+4
[d091e8ba] + Xorg_libXfixes_jll v5.0.3+4
[a51aa0fd] + Xorg_libXi_jll v1.7.10+4
[d1454406] + Xorg_libXinerama_jll v1.1.4+4
[ec84b674] + Xorg_libXrandr_jll v1.5.2+4
[ea2f1a96] + Xorg_libXrender_jll v0.9.10+4
[14d82f49] + Xorg_libpthread_stubs_jll v0.1.1+0
[c7cfdc94] + Xorg_libxcb_jll v1.15.0+0
[cc61e674] + Xorg_libxkbfile_jll v1.1.2+0
[e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.4+0
[12413925] + Xorg_xcb_util_image_jll v0.4.0+1
[2def613f] + Xorg_xcb_util_jll v0.4.0+1
[975044d2] + Xorg_xcb_util_keysyms_jll v0.4.0+1
[0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.9+1
[c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.1+1
[35661453] + Xorg_xkbcomp_jll v1.4.6+0
[33bec58e] + Xorg_xkeyboard_config_jll v2.39.0+0
[c5fb5394] + Xorg_xtrans_jll v1.5.0+0
[3161d3a3] + Zstd_jll v1.5.5+0
[35ca27e7] + eudev_jll v3.2.9+0
[214eeab7] + fzf_jll v0.43.0+0
[1a1c6b14] + gperf_jll v3.1.1+0
[a4ae2306] + libaom_jll v3.4.0+0
[0ac62f75] + libass_jll v0.15.1+0
[2db6ffa8] + libevdev_jll v1.11.0+0
[f638f0a6] + libfdk_aac_jll v2.0.2+0
[36db933b] + libinput_jll v1.18.0+0
[b53b4c65] + libpng_jll v1.6.40+0
[f27f6e37] + libvorbis_jll v1.3.7+1
[009596ad] + mtdev_jll v1.1.6+0
[1270edf5] + x264_jll v2021.5.5+0
[dfaa095f] + x265_jll v3.5.0+0
[d8fb68d0] + xkbcommon_jll v1.4.1+1
[0dad84c5] + ArgTools v1.1.1
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[f43a241f] + Downloads v1.6.0
[7b1f6079] + FileWatching
[b77e0a4c] + InteractiveUtils
[b27032c2] + LibCURL v0.6.4
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[ca575930] + NetworkOptions v1.2.0
[44cfe95a] + Pkg v1.10.0
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA v0.7.0
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays v1.10.0
[10745b16] + Statistics v1.10.0
[fa267f1f] + TOML v1.0.3
[a4e569a6] + Tar v1.10.0
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
[e66e0078] + CompilerSupportLibraries_jll v1.1.0+0
[deac9b47] + LibCURL_jll v8.4.0+0
[e37daf67] + LibGit2_jll v1.6.4+0
[29816b5a] + LibSSH2_jll v1.11.0+1
[c8ffd9c3] + MbedTLS_jll v2.28.2+1
[14a3606d] + MozillaCACerts_jll v2023.1.10
[4536629a] + OpenBLAS_jll v0.3.23+4
[05823500] + OpenLibm_jll v0.8.1+2
[efcefdf7] + PCRE2_jll v10.42.0+1
[bea87d4a] + SuiteSparse_jll v7.2.1+1
[83775a58] + Zlib_jll v1.2.13+1
[8e850b90] + libblastrampoline_jll v5.8.0+1
[8e850ede] + nghttp2_jll v1.52.0+1
[3f19e933] + p7zip_jll v17.4.0+2
Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
(jl_lMloNq) pkg> add PyPlot
Resolving package versions...
Updating `/tmp/jl_lMloNq/Project.toml`
[d330b81b] + PyPlot v2.11.2
Updating `/tmp/jl_lMloNq/Manifest.toml`
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/OpenLibm_jll/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /home/jishnu/packages/julias/julia-1.10/share/julia/stdlib/v1.10/Statistics/src/Statistics.jl/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /home/jishnu/packages/julias/julia-1.10/share/julia/stdlib/v1.10/CompilerSupportLibraries_jll/src/CompilerSupportLibraries_jll.jl/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SuiteSparse_jll/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/Zlib_jll/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/PCRE2_jll/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/lib is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
[8f4d0f93] + Conda v1.10.0
[438e738f] + PyCall v1.96.4
[d330b81b] + PyPlot v2.11.2
[81def892] + VersionParsing v1.3.0
julia> plotly()
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/abstractsparse.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparseconvert.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/higherorderfns.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /home/jishnu/packages/julias/julia-1.10/share/julia/stdlib/v1.10/CompilerSupportLibraries_jll/src/CompilerSupportLibraries_jll.jl/src/CompilerSupportLibraries_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparsematrix.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparsevector.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/deprecated.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/OpenLibm_jll/src/OpenLibm_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SuiteSparse_jll/src/SuiteSparse_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /home/jishnu/packages/julias/julia-1.10/share/julia/stdlib/v1.10/Statistics/src/Statistics.jl/src/Statistics.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/PCRE2_jll/src/PCRE2_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/SparseArrays.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/readonly.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/linalg.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/spqr.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/Zlib_jll/src/Zlib_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/LibSuiteSparse.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/lib/x86_64-linux-gnu.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/umfpack.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/cholmod.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: Failed to load integration with PlotlyBase & PlotlyKaleido.
│ exception =
│ ArgumentError: Package PlotlyKaleido not found in current path.
│ - Run `import Pkg; Pkg.add("PlotlyKaleido")` to install the PlotlyKaleido package.
│ Stacktrace:
│ [1] macro expansion
│ @ ./loading.jl:1772 [inlined]
│ [2] macro expansion
│ @ ./lock.jl:267 [inlined]
│ [3] __require(into::Module, mod::Symbol)
│ @ Base ./loading.jl:1753
│ [4] #invoke_in_world#3
│ @ ./essentials.jl:926 [inlined]
│ [5] invoke_in_world
│ @ ./essentials.jl:923 [inlined]
│ [6] require(into::Module, mod::Symbol)
│ @ Base ./loading.jl:1746
│ [7] top-level scope
│ @ ~/.julia/packages/Plots/HyyIK/src/backends.jl:566
│ [8] eval
│ @ ./boot.jl:385 [inlined]
│ [9] _initialize_backend(pkg::Plots.PlotlyBackend)
│ @ Plots ~/.julia/packages/Plots/HyyIK/src/backends.jl:564
│ [10] backend
│ @ ~/.julia/packages/Plots/HyyIK/src/backends.jl:244 [inlined]
│ [11] plotly()
│ @ Plots ~/.julia/packages/Plots/HyyIK/src/backends.jl:87
│ [12] top-level scope
│ @ REPL[4]:1
│ [13] eval
│ @ ./boot.jl:385 [inlined]
│ [14] eval_user_input(ast::Any, backend::REPL.REPLBackend, mod::Module)
│ @ REPL ~/packages/julias/julia-1.10/share/julia/stdlib/v1.10/REPL/src/REPL.jl:150
│ [15] repl_backend_loop(backend::REPL.REPLBackend, get_module::Function)
│ @ REPL ~/packages/julias/julia-1.10/share/julia/stdlib/v1.10/REPL/src/REPL.jl:246
│ [16] start_repl_backend(backend::REPL.REPLBackend, consumer::Any; get_module::Function)
│ @ REPL ~/packages/julias/julia-1.10/share/julia/stdlib/v1.10/REPL/src/REPL.jl:231
│ [17] run_repl(repl::REPL.AbstractREPL, consumer::Any; backend_on_current_task::Bool, backend::Any)
│ @ REPL ~/packages/julias/julia-1.10/share/julia/stdlib/v1.10/REPL/src/REPL.jl:389
│ [18] run_repl(repl::REPL.AbstractREPL, consumer::Any)
│ @ REPL ~/packages/julias/julia-1.10/share/julia/stdlib/v1.10/REPL/src/REPL.jl:375
│ [19] (::Base.var"#1013#1015"{Bool, Bool, Bool})(REPL::Module)
│ @ Base ./client.jl:432
│ [20] #invokelatest#2
│ @ ./essentials.jl:892 [inlined]
│ [21] invokelatest
│ @ ./essentials.jl:889 [inlined]
│ [22] run_main_repl(interactive::Bool, quiet::Bool, banner::Bool, history_file::Bool, color_set::Bool)
│ @ Base ./client.jl:416
│ [23] exec_options(opts::Base.JLOptions)
│ @ Base ./client.jl:333
│ [24] _start()
│ @ Base ./client.jl:552
└ @ Plots ~/.julia/packages/Plots/HyyIK/src/backends.jl:574
Plots.PlotlyBackend()These seem to persist even if I delete the compiled cache and the package directories, as well as the default environment manifest.
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