diff --git a/cran-comments.md b/cran-comments.md index 7e400de8..c13495c7 100644 --- a/cran-comments.md +++ b/cran-comments.md @@ -11,25 +11,35 @@ ## revdepcheck results -We checked 44 reverse dependencies (43 from CRAN + 1 from BioConductor), comparing R CMD check results across CRAN and dev versions of this package. +We checked 45 reverse dependencies (44 from CRAN + 1 from BioConductor), comparing R CMD check results across CRAN and dev versions of this package. - * We saw 1 new problems - * We failed to check 3 packages + * We saw 4 new problems + * We failed to check 2 packages -Issues with CRAN packages are summarised below: package authors were notified one month ago, and again today. +Issues with CRAN packages are summarised below. + +All authors have been notified of the problems (with over a months notice) ### New problems (This reports the first line of each new failure) +* codebook + checking examples ... ERROR + checking re-building of vignette outputs ... WARNING + +* crosswalkr + checking tests ... + * labelled checking examples ... ERROR checking tests ... checking for code/documentation mismatches ... WARNING checking re-building of vignette outputs ... WARNING - checking R code for possible problems ... NOTE + +* rio + checking examples ... ERROR ### Failed to check -* BEACH (failed to install) * bpnreg (failed to install) * ImportExport (failed to install) diff --git a/revdep/README.md b/revdep/README.md index 16cb50a2..86ab6b35 100644 --- a/revdep/README.md +++ b/revdep/README.md @@ -3,14 +3,14 @@ |field |value | |:--------|:----------------------------| |version |R version 3.5.1 (2018-07-02) | -|os |macOS High Sierra 10.13.6 | +|os |macOS 10.14.1 | |system |x86_64, darwin15.6.0 | |ui |RStudio | |language |(EN) | |collate |en_US.UTF-8 | |ctype |en_US.UTF-8 | |tz |America/Chicago | -|date |2018-10-23 | +|date |2018-11-20 | # Dependencies @@ -28,9 +28,9 @@ |pillar |1.3.0 |1.3.0 | | |pkgconfig |2.0.2 |2.0.2 | | |R6 |2.3.0 |2.3.0 | | -|Rcpp |0.12.19 |0.12.19 | | +|Rcpp |1.0.0 |1.0.0 | | |readr |1.1.1 |1.1.1 | | -|rlang |0.3.0 |0.3.0 | | +|rlang |0.3.0.1 |0.3.0.1 | | |tibble |1.4.2 |1.4.2 | | |utf8 |1.1.4 |1.1.4 | | @@ -52,7 +52,7 @@ |[labelled](problems.md#labelled) |1.1.0 |__+2__ |__+2__ |2 | |[rio](problems.md#rio) |0.5.10 |__+1__ | | | -## All (44) +## All (45) |package |version |error |warning |note | |:----------------------------------------|:-------|:------|:-------|:----| @@ -65,27 +65,28 @@ |[crunch](problems.md#crunch) |1.24.0 | | |2 | |[datadigest](problems.md#datadigest) |1.0.2 | | |1 | |[dataMaid](problems.md#datamaid) |1.2.0 | | |1 | -|[descriptr](problems.md#descriptr) |0.4.1 |1 | | | +|descriptr |0.4.1 | | | | |DHS.rates |0.4.0 | | | | |[duawranglr](problems.md#duawranglr) |0.6.3 | | |1 | -|EdSurvey |2.0.3 | | | | +|[EdSurvey](problems.md#edsurvey) |2.2.2 | | |1 | |electionsBR |0.3.0 | | | | |[ess](problems.md#ess) |0.1.1 |1 | |1 | |essurvey |1.0.2 | | | | +|frequency |0.3.1 | | | | |ggplotgui |1.0.0 | | | | -|[HMP16SData](problems.md#hmp16sdata) |1.0.1 | |1 |2 | +|[HMP16SData](problems.md#hmp16sdata) |1.2.0 | |1 |2 | |[ImportExport](problems.md#importexport) |1.1 |1 | | | |inferr |0.3.0 | | | | -|[ipumsr](problems.md#ipumsr) |0.3.0 | | |2 | +|[ipumsr](problems.md#ipumsr) |0.3.0 | | |1 | |[labelled](problems.md#labelled) |1.1.0 |__+2__ |__+2__ |2 | |[manifestoR](problems.md#manifestor) |1.3.0 | | |2 | -|[memapp](problems.md#memapp) |2.10 | | |1 | +|[memapp](problems.md#memapp) |2.11 | | |1 | |miceadds |2.15-22 | | | | |mitml |0.3-6 | | | | |[netCoin](problems.md#netcoin) |0.3.0 | | |1 | |olsrr |0.5.1 | | | | -|[opencpu](problems.md#opencpu) |2.0.8 |1 | | | -|[pubh](problems.md#pubh) |0.4.2 | | |1 | +|[opencpu](problems.md#opencpu) |2.1 | | |1 | +|[pubh](problems.md#pubh) |0.4.3 | | |1 | |RcmdrMisc |2.5-1 | | | | |[readit](problems.md#readit) |1.0.0 | | |1 | |rfm |0.1.0 | | | | @@ -96,7 +97,7 @@ |sdcMicro |5.3.0 | | | | |[simPop](problems.md#simpop) |1.1.1 | | |1 | |sjlabelled |1.0.14 | | | | -|sjmisc |2.7.5 | | | | +|sjmisc |2.7.6 | | | | |[tidyverse](problems.md#tidyverse) |1.2.1 | | |1 | |webuse |0.1.3 | | | | |[xSub](problems.md#xsub) |2.0.1 | | |1 | diff --git a/revdep/problems.md b/revdep/problems.md index 1d474a91..73df755f 100644 --- a/revdep/problems.md +++ b/revdep/problems.md @@ -20,7 +20,7 @@ Version: 2.0.8 * checking package dependencies ... ERROR ``` - Package required but not available: ‘gWidgetsRGtk2’ + Packages required but not available: ‘gWidgetsRGtk2’ ‘RGtk2’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. @@ -91,7 +91,7 @@ Version: 0.6.3 > bfi <- bfi[,c("BFIK_open", paste0("BFIK_open_", 1:4))] > codebook_component_scale(bfi[,1], "BFIK_open", bfi[,-1], + reliabilities = list(BFIK_open = psych::alpha(bfi[,-1]))) - Error: C stack usage 7969616 is too close to the limit + Error: C stack usage 7969220 is too close to the limit Execution halted ``` @@ -99,7 +99,7 @@ Version: 0.6.3 ``` Error in re-building vignettes: ... - Error: C stack usage 7970928 is too close to the limit + Error: C stack usage 7970848 is too close to the limit Execution halted ``` @@ -129,7 +129,7 @@ Version: 0.1.1 Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: > test_check("crosswalkr") - ── 1. Failure: Failed to assign proper values (@test-encodefrom.R#67)  ────────────────────────────────────────────────────────────── + ── 1. Failure: Failed to assign proper values (@test-encodefrom.R#67)  ───────────────────────────────────────────── haven::zap_labels(vec) not equal to `act_vals`. Attributes: < Modes: list, NULL > Attributes: < Lengths: 2, 0 > @@ -137,7 +137,7 @@ Version: 0.1.1 Attributes: < current is not list-like > target is labelled, current is character - ══ testthat results ════════════════════════════════════════════════════════════════════════════════════════════════════════════════ + ══ testthat results ═══════════════════════════════════════════════════════════════════════════════════════════════ OK: 36 SKIPPED: 0 FAILED: 1 1. Failure: Failed to assign proper values (@test-encodefrom.R#67) @@ -196,49 +196,30 @@ Version: 1.2.0 All declared Imports should be used. ``` -# descriptr +# duawranglr -Version: 0.4.1 +Version: 0.6.3 ## In both -* checking examples ... ERROR +* checking dependencies in R code ... NOTE ``` - ... - | | 0.13 | 0.33 | 0.2 | | - ---------------------------------------------------------------------------- - | 8 | 12 | 0 | 2 | 14 | - | | 0.375 | 0 | 0.062 | | - | | 0.86 | 0 | 0.14 | 0.44 | - | | 0.8 | 0 | 0.4 | | - ---------------------------------------------------------------------------- - | Column Total | 15 | 12 | 5 | 32 | - | | 0.468 | 0.375 | 0.155 | | - ---------------------------------------------------------------------------- - > - > # bar plots - > plot(k) - > plot(k, stacked = TRUE) - > plot(k, proportional = TRUE) - > - > # alternate - > ds_twoway_table(mtcarz, cyl, gear) - Error in n() : could not find function "n" - Calls: ds_twoway_table ... -> summarise -> summarise.tbl_df -> summarise_impl - Execution halted + Namespaces in Imports field not imported from: + ‘digest’ ‘dplyr’ + All declared Imports should be used. ``` -# duawranglr +# EdSurvey -Version: 0.6.3 +Version: 2.2.2 ## In both -* checking dependencies in R code ... NOTE +* checking installed package size ... NOTE ``` - Namespaces in Imports field not imported from: - ‘digest’ ‘dplyr’ - All declared Imports should be used. + installed size is 5.8Mb + sub-directories of 1Mb or more: + R 4.1Mb ``` # ess @@ -253,11 +234,11 @@ Version: 0.1.1 Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: - ── 5. Failure: show_country_rounds returns correct rounds for countries (@test-show_.R#101)  ──────────────────────────────────────── + ── 5. Failure: show_country_rounds returns correct rounds for countries (@test-show_.R#101)  ─────────────────────── show_country_rounds("Spain") not equal to 1:7. Lengths differ: 9 is not 7 - ══ testthat results ════════════════════════════════════════════════════════════════════════════════════════════════════════════════ + ══ testthat results ═══════════════════════════════════════════════════════════════════════════════════════════════ OK: 33 SKIPPED: 23 FAILED: 5 1. Failure: show_country_rounds returns correct rounds for countries (@test-show_.R#97) 2. Failure: show_country_rounds returns correct rounds for countries (@test-show_.R#98) @@ -277,7 +258,7 @@ Version: 0.1.1 # HMP16SData -Version: 1.0.1 +Version: 1.2.0 ## In both @@ -381,11 +362,6 @@ Version: 0.3.0 ## In both -* checking package dependencies ... NOTE - ``` - Package suggested but not available for checking: ‘sf’ - ``` - * checking dependencies in R code ... NOTE ``` Namespace in Imports field not imported from: ‘R6’ @@ -429,7 +405,7 @@ Version: 1.1.0 ERROR Running the tests in ‘tests/testthat.R’ failed. Last 13 lines of output: - ══ testthat results ════════════════════════════════════════════════════════════════════════════════════════════════════════════════ + ══ testthat results ═══════════════════════════════════════════════════════════════════════════════════════════════ OK: 20 SKIPPED: 0 FAILED: 18 1. Failure: labelled return an object of class labelled (@test-labelled.r#6) 2. Failure: labelled preserves variable label (@test-labelled.r#27) @@ -468,6 +444,8 @@ Version: 1.1.0 ``` Error in re-building vignettes: ... + Warning in engine$weave(file, quiet = quiet, encoding = enc) : + The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it. Quitting from lines 73-77 (intro_labelled.Rmd) Error: processing vignette 'intro_labelled.Rmd' failed with diagnostics: no applicable method for 'val_label<-' applied to an object of class "haven_labelled" @@ -510,7 +488,7 @@ Version: 1.3.0 # memapp -Version: 2.10 +Version: 2.11 ## In both @@ -518,8 +496,9 @@ Version: 2.10 ``` Namespaces in Imports field not imported from: ‘DT’ ‘RColorBrewer’ ‘RODBC’ ‘dplyr’ ‘foreign’ ‘formattable’ ‘ggplot2’ - ‘haven’ ‘magrittr’ ‘mem’ ‘openxlsx’ ‘plotly’ ‘readxl’ ‘shinyBS’ - ‘shinydashboard’ ‘shinyjs’ ‘shinythemes’ ‘stringi’ ‘stringr’ ‘tidyr’ + ‘haven’ ‘mem’ ‘openxlsx’ ‘plotly’ ‘readxl’ ‘shinyBS’ ‘shinydashboard’ + ‘shinydashboardPlus’ ‘shinyjs’ ‘shinythemes’ ‘stringi’ ‘stringr’ + ‘tidyr’ All declared Imports should be used. ``` @@ -536,21 +515,18 @@ Version: 0.3.0 # opencpu -Version: 2.0.8 +Version: 2.1 ## In both -* checking package dependencies ... ERROR +* checking data for non-ASCII characters ... NOTE ``` - Package required but not available: ‘devtools’ - - See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ - manual. + Note: found 4 marked UTF-8 strings ``` # pubh -Version: 0.4.2 +Version: 0.4.3 ## In both