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Add to documentation #74

Merged
merged 3 commits into from
Apr 5, 2024
Merged

Add to documentation #74

merged 3 commits into from
Apr 5, 2024

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eberrigan
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@eberrigan eberrigan commented Apr 5, 2024

  • Made inputs for MultipleDicotPipeline explanation in jupyter notebook more clear
  • Added HackMD to README for full trait list per pipeline

Summary by CodeRabbit

  • Documentation
    • Added a link to detailed trait documentation for pipelines in the project documentation.
  • New Features
    • Expanded the MultipleDicotPipeline to include genotype summary statistics retrieval, now requiring genotype information in the input CSV.

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coderabbitai bot commented Apr 5, 2024

Walkthrough

The recent update brings a significant enhancement to the project's functionality. The README.md now includes a link to detailed trait documentation, enriching user guidance. Moreover, the MultipleDicotPipeline in the notebook has been improved to extract genotype summary statistics from an input CSV file, requiring genotype data in the CSV for analysis.

Changes

Files Change Summary
README.md Added a link to detailed trait documentation for pipelines.
notebooks/...DicotPipeline.ipynb Expanded to include genotype summary statistics retrieval from an input CSV file.

🐇✨

In the code's garden, under the moon's soft swirl,
A rabbit appeared with a change, a precious pearl.
"See here," it whispered, "a link to unfurl,
With stats and insights, our data unfurls.
So let's explore these updates and give them a twirl!
🌿📈

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@eberrigan eberrigan changed the title Elizabeth/add to documentation Add to documentation Apr 5, 2024
@eberrigan eberrigan merged commit 05aa0e5 into main Apr 5, 2024
@eberrigan eberrigan deleted the elizabeth/Add-to-documentation branch April 5, 2024 17:22
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Actionable comments posted: 0

Review Status

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between f481287 and 0372573.
Files selected for processing (2)
  • README.md (1 hunks)
  • notebooks/MultipleDicotPipeline.ipynb (1 hunks)
Additional comments not posted (1)
README.md (1)

24-26: Ensure the HackMD link is correctly formatted and accessible.

Detailed trait documentation per pipeline is available here:
- [sleap-roots HackMD](https://hackmd.io/DMiXO2kXQhKH8AIIcIy--g)
+ [sleap-roots HackMD](https://hackmd.io/DMiXO2kXQhKH8AIIcIy--g)

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Actionable comments posted: 0

Review Status

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between 0372573 and 399e3db.
Files selected for processing (1)
  • README.md (1 hunks)
Additional comments not posted (1)
README.md (1)

24-26: Please ensure the link to the HackMD document is accessible to all intended users. If the document has restricted access, consider adding guidance on how users can request access.

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