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Commits on Aug 10, 2018

• removing more excess files

  stevemussmann

  committed
  e61d589

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• removing excess files

  stevemussmann

  committed
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• converting to new directory structure

  stevemussmann

  committed
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• switching to autotools build

  stevemussmann

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Commits on Aug 5, 2018

• Update README.md

  

  Steve Mussmann

  authored
  dc77f57

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• added new command line options; structure files now fully integrated

  stevemussmann

  committed
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• now reads structure file

  stevemussmann

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Commits on Aug 4, 2018

• added p-value calculations

  stevemussmann

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• added z-score calculations

  stevemussmann

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• bootstrapping now fully implemented

  stevemussmann

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• bootstrapping implemented

  stevemussmann

  committed
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• added error checking for taxon file

  stevemussmann

  committed
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• reverted ancestral allele calling to old method

  stevemussmann

  committed
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• added new menu options

  stevemussmann

  committed
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• overhauled fnStats class; removed a ton of redundant code

  stevemussmann

  committed
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• renamed getDlocus function

  stevemussmann

  committed
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• updated getLength function in fnFiles class

  stevemussmann

  committed
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• code for blacklisting loci significantly more flexible

  stevemussmann

  committed
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• data structure significantly improved

  stevemussmann

  committed
  1b1b09f

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• added new data structure - not fully implemented yet

  stevemussmann

  committed
  86297ee

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• removed outgroup requirement

  stevemussmann

  committed
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• changed method of finding ancestral allele; added mean calculations for f2,f3,f4

  stevemussmann

  committed
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Commits on Jul 30, 2018

• added f2, f3, f4, and fst calculations per locus

  stevemussmann

  committed
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• calculates population allele frequencies

  stevemussmann

  committed
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• found ancestral alleles

  stevemussmann

  committed
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• started finding ancestral alleles

  stevemussmann

  committed
  09bd2d5

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• added blacklist function

  stevemussmann

  committed
  5310c22

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• started calculating allele frequencies

  stevemussmann

  committed
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Commits on Jul 27, 2018

• updated Makefile to compile fn

  stevemussmann

  committed
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• Update README.md

  

  Steve Mussmann

  authored
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• Update README.md

  

  Steve Mussmann

  authored
  8e39861

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• Merge branch 'master' of https://github.com/smussmann82/Comp-D_MPI

  stevemussmann

  committed
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• Began adding accessory program to calculate F2, F3, and F4 statistics

  stevemussmann

  committed
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Commits on Jun 29, 2018

• Delete example.cpp

  

  Steve Mussmann

  authored
  394c237

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• Update README.md

  

  Steve Mussmann

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