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lines changed Original file line number Diff line number Diff line change @@ -31,13 +31,15 @@ The following files are created:
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- ` gencode.v19.annotation.genes.bed ` : Gencode hg19 gene annotations & genomic regions
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- - ` Homo_sapiens.GRCh37.82.noGLMT.chr.bed ` : Ensembl hg19 gene annotations & genomic regions, with the following lines removed :
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+ - ` Homo_sapiens.GRCh37.82.noGLMT.chr.bed ` : Ensembl hg19 gene annotations & genomic regions, with the following modifications :
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- - file comments
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+ - removed file comments
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- - entries with 'MT' listed for chromosome
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+ - removed entries with 'MT' listed for chromosome
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- - entries with 'GL....' listed for chromosome, e.g. 'GL000229.1'
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+ - removed entries with 'GL....' listed for chromosome, e.g. 'GL000229.1'
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+ - added 'chr' to the start of all chromosome labels
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# Notes
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