diff --git a/DESCRIPTION b/DESCRIPTION
index 3bf4482..c763033 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,7 +1,7 @@
 Type: Package
 Package: CuratedAtlasQueryR
 Title: Queries the Human Cell Atlas
-Version: 1.3.5
+Version: 1.3.6
 Authors@R: c(
     person(
         "Stefano",
diff --git a/R/counts.R b/R/counts.R
index c0957c5..becb1b2 100644
--- a/R/counts.R
+++ b/R/counts.R
@@ -37,6 +37,11 @@ pseudobulk_url <- single_line_str(
 #' @inheritDotParams get_single_cell_experiment
 #' @importFrom cli cli_alert_warning
 #' @export
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_SingleCellExperiment <- function(...){
   single_line_str("This function name is deprecated. 
                     Please use `get_single_cell_experiment()` instead") |>
@@ -55,6 +60,11 @@ get_SingleCellExperiment <- function(...){
 #' meta <- get_metadata() |> head(2)
 #' sce <- get_single_cell_experiment(meta)
 #' @export
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_single_cell_experiment <- function(data, ...){
   raw_data <- collect(data)
   assert_that(
@@ -77,6 +87,11 @@ get_single_cell_experiment <- function(data, ...){
 #' pseudobulk <- meta |> get_pseudobulk()
 #' }
 #' @export
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_pseudobulk <- function(data, ...) {
   raw_data <- collect(data)
   assert_that(
@@ -118,6 +133,11 @@ get_pseudobulk <- function(data, ...) {
 #' @importFrom cli cli_alert_success cli_alert_info
 #' @importFrom rlang .data
 #' @importFrom S4Vectors DataFrame
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_data_container <- function(
     data,
     assays = "counts",
diff --git a/R/data.R b/R/data.R
index d950d16..8bb4598 100644
--- a/R/data.R
+++ b/R/data.R
@@ -5,4 +5,10 @@
 #' @format An object of class \code{SingleCellExperiment}
 #' @source HeOrganAtlasData Liver 
 #' @keywords datasets
+#' @docType data
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 "sample_sce_obj"
diff --git a/R/import_metadata_and_counts.R b/R/import_metadata_and_counts.R
index fb56b40..04882ab 100644
--- a/R/import_metadata_and_counts.R
+++ b/R/import_metadata_and_counts.R
@@ -20,6 +20,11 @@
 #' data(sample_sce_obj)
 #' import_one_sce(sample_sce_obj,
 #'                cache_dir = get_default_cache_dir())
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 import_one_sce <- function(
     sce_obj,  
     cache_dir = get_default_cache_dir()
diff --git a/R/metadata.R b/R/metadata.R
index f45cf11..7d5de48 100644
--- a/R/metadata.R
+++ b/R/metadata.R
@@ -15,6 +15,11 @@ cache <- rlang::env(
 #' @return A character vector of URLs to parquet files to download
 #' @examples
 #' get_database_url("metadata.0.2.3.parquet")
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_database_url <- function(databases = c("metadata.0.2.3.parquet", "fibrosis.0.2.3.parquet")) {
   glue::glue(
     "https://object-store.rc.nectar.org.au/v1/AUTH_06d6e008e3e642da99d806ba3ea629c5/metadata/{databases}")
@@ -26,6 +31,11 @@ get_database_url <- function(databases = c("metadata.0.2.3.parquet", "fibrosis.0
 #' @return A character scalar consisting of the URL
 #' @examples
 #' get_metadata(remote_url = SAMPLE_DATABASE_URL, cache_directory = tempdir())
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 SAMPLE_DATABASE_URL <- single_line_str(
   "https://object-store.rc.nectar.org.au/v1/
     AUTH_06d6e008e3e642da99d806ba3ea629c5/metadata/
@@ -142,6 +152,12 @@ SAMPLE_DATABASE_URL <- single_line_str(
 #' ```R
 #' get_metadata(cache_directory = path.expand('~'))
 #' ```
+#' 
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_metadata <- function(
     remote_url = get_database_url(),
     cache_directory = get_default_cache_dir(),
diff --git a/R/seurat.R b/R/seurat.R
index 7648f8d..39a0e8c 100644
--- a/R/seurat.R
+++ b/R/seurat.R
@@ -21,7 +21,11 @@ as.sparse.DelayedMatrix <- function(x, ...) {
 #' @examples
 #' meta <- get_metadata() |> head(2)
 #' seurat <- get_seurat(meta)
-#'
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_seurat <- function(...) {
     get_single_cell_experiment(...) |> as.Seurat(data = NULL)
 }
diff --git a/R/unharmonised.R b/R/unharmonised.R
index 48f4870..09629bc 100644
--- a/R/unharmonised.R
+++ b/R/unharmonised.R
@@ -45,6 +45,11 @@ UNHARMONISED_URL <- single_line_str(
 #' unharmonised_tbl <- dplyr::collect(unharmonised_meta[[dataset]])
 #' dplyr::left_join(harmonised_meta, unharmonised_tbl, by=c("file_id", "cell_"))
 #' }
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_unharmonised_dataset <- function(
     dataset_id,
     cells = NULL,
@@ -85,6 +90,11 @@ get_unharmonised_dataset <- function(
 #' @examples
 #' harmonised <- dplyr::filter(get_metadata(), tissue == "kidney blood vessel")
 #' unharmonised <- get_unharmonised_metadata(harmonised)
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_unharmonised_metadata <- function(metadata, ...){
     args <- list(...)
     metadata |>
diff --git a/R/utils.R b/R/utils.R
index ae7108a..3161da5 100644
--- a/R/utils.R
+++ b/R/utils.R
@@ -48,6 +48,11 @@ single_line_str <- function(text){
 #' @importFrom utils packageName
 #' @examples
 #' get_metadata(cache_directory = get_default_cache_dir())
+#' @references Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, 
+#'   A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human 
+#'   immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+#'   doi:10.1101/2023.06.08.542671.
+#' @source [Mangiola et al.,2023](https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3)
 get_default_cache_dir <- function() {
     packageName() |>
         R_user_dir(
diff --git a/man/SAMPLE_DATABASE_URL.Rd b/man/SAMPLE_DATABASE_URL.Rd
index 33d0927..dc7d007 100644
--- a/man/SAMPLE_DATABASE_URL.Rd
+++ b/man/SAMPLE_DATABASE_URL.Rd
@@ -8,6 +8,9 @@ demonstration, and vignette purposes only}
 \format{
 An object of class \code{character} of length 1.
 }
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 SAMPLE_DATABASE_URL
 }
@@ -21,4 +24,10 @@ demonstration, and vignette purposes only
 \examples{
 get_metadata(remote_url = SAMPLE_DATABASE_URL, cache_directory = tempdir())
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
 \keyword{datasets}
diff --git a/man/get_SingleCellExperiment.Rd b/man/get_SingleCellExperiment.Rd
index c02fe9b..63d9898 100644
--- a/man/get_SingleCellExperiment.Rd
+++ b/man/get_SingleCellExperiment.Rd
@@ -3,6 +3,9 @@
 \name{get_SingleCellExperiment}
 \alias{get_SingleCellExperiment}
 \title{Gets a SingleCellExperiment from curated metadata}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_SingleCellExperiment(...)
 }
@@ -22,3 +25,9 @@ Gets a SingleCellExperiment from curated metadata
 meta <- get_metadata() |> head(2)
 sce <- get_single_cell_experiment(meta)
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/get_data_container.Rd b/man/get_data_container.Rd
index d3a1578..d3a8735 100644
--- a/man/get_data_container.Rd
+++ b/man/get_data_container.Rd
@@ -3,6 +3,9 @@
 \name{get_data_container}
 \alias{get_data_container}
 \title{Gets data from curated metadata container}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_data_container(
   data,
@@ -41,3 +44,9 @@ Given a data frame of Curated Atlas metadata obtained from \code{\link[=get_meta
 returns a \code{\link[SummarizedExperiment:SummarizedExperiment-class]{SummarizedExperiment::SummarizedExperiment}} object
 corresponding to the samples in that data frame
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/get_database_url.Rd b/man/get_database_url.Rd
index 0140f13..2962d1b 100644
--- a/man/get_database_url.Rd
+++ b/man/get_database_url.Rd
@@ -3,6 +3,9 @@
 \name{get_database_url}
 \alias{get_database_url}
 \title{Returns the URLs for all metadata files}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_database_url(
   databases = c("metadata.0.2.3.parquet", "fibrosis.0.2.3.parquet")
@@ -20,3 +23,9 @@ Returns the URLs for all metadata files
 \examples{
 get_database_url("metadata.0.2.3.parquet")
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/get_default_cache_dir.Rd b/man/get_default_cache_dir.Rd
index 834b7d0..5fffe1c 100644
--- a/man/get_default_cache_dir.Rd
+++ b/man/get_default_cache_dir.Rd
@@ -3,6 +3,9 @@
 \name{get_default_cache_dir}
 \alias{get_default_cache_dir}
 \title{Returns the default cache directory with a version number}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_default_cache_dir()
 }
@@ -15,3 +18,9 @@ Returns the default cache directory with a version number
 \examples{
 get_metadata(cache_directory = get_default_cache_dir())
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/get_metadata.Rd b/man/get_metadata.Rd
index 81d4fd6..5d5fbc1 100644
--- a/man/get_metadata.Rd
+++ b/man/get_metadata.Rd
@@ -3,6 +3,9 @@
 \name{get_metadata}
 \alias{get_metadata}
 \title{Gets the Curated Atlas metadata as a data frame.}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_metadata(
   remote_url = get_database_url(),
@@ -117,3 +120,9 @@ filtered_metadata <- get_metadata() |>
     )
 
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/get_pseudobulk.Rd b/man/get_pseudobulk.Rd
index 49f602a..3295098 100644
--- a/man/get_pseudobulk.Rd
+++ b/man/get_pseudobulk.Rd
@@ -3,6 +3,9 @@
 \name{get_pseudobulk}
 \alias{get_pseudobulk}
 \title{Gets a Pseudobulk from curated metadata}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_pseudobulk(data, ...)
 }
@@ -39,3 +42,9 @@ meta <- get_metadata() |> filter(tissue_harmonised == "lung")
 pseudobulk <- meta |> get_pseudobulk()
 }
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/get_seurat.Rd b/man/get_seurat.Rd
index b087bd4..b41d799 100644
--- a/man/get_seurat.Rd
+++ b/man/get_seurat.Rd
@@ -4,6 +4,9 @@
 \alias{get_seurat}
 \title{Given a data frame of HCA metadata, returns a Seurat object corresponding to
 the samples in that data frame}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_seurat(...)
 }
@@ -27,5 +30,10 @@ the samples in that data frame
 \examples{
 meta <- get_metadata() |> head(2)
 seurat <- get_seurat(meta)
-
+}
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
 }
diff --git a/man/get_single_cell_experiment.Rd b/man/get_single_cell_experiment.Rd
index 44de354..1024560 100644
--- a/man/get_single_cell_experiment.Rd
+++ b/man/get_single_cell_experiment.Rd
@@ -3,6 +3,9 @@
 \name{get_single_cell_experiment}
 \alias{get_single_cell_experiment}
 \title{Gets a SingleCellExperiment from curated metadata}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_single_cell_experiment(data, ...)
 }
@@ -36,3 +39,9 @@ Gets a SingleCellExperiment from curated metadata
 meta <- get_metadata() |> head(2)
 sce <- get_single_cell_experiment(meta)
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/get_unharmonised_dataset.Rd b/man/get_unharmonised_dataset.Rd
index 3402325..0ef0e3f 100644
--- a/man/get_unharmonised_dataset.Rd
+++ b/man/get_unharmonised_dataset.Rd
@@ -3,6 +3,9 @@
 \name{get_unharmonised_dataset}
 \alias{get_unharmonised_dataset}
 \title{Returns unharmonised metadata for selected datasets.}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_unharmonised_dataset(
   dataset_id,
@@ -49,3 +52,9 @@ unharmonised_tbl <- dplyr::collect(unharmonised_meta[[dataset]])
 dplyr::left_join(harmonised_meta, unharmonised_tbl, by=c("file_id", "cell_"))
 }
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/get_unharmonised_metadata.Rd b/man/get_unharmonised_metadata.Rd
index 0ef4afb..498bc43 100644
--- a/man/get_unharmonised_metadata.Rd
+++ b/man/get_unharmonised_metadata.Rd
@@ -3,6 +3,9 @@
 \name{get_unharmonised_metadata}
 \alias{get_unharmonised_metadata}
 \title{Returns unharmonised metadata for a metadata query}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 get_unharmonised_metadata(metadata, ...)
 }
@@ -45,3 +48,9 @@ utility that allows easy fetching of this data if necessary.
 harmonised <- dplyr::filter(get_metadata(), tissue == "kidney blood vessel")
 unharmonised <- get_unharmonised_metadata(harmonised)
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/import_one_sce.Rd b/man/import_one_sce.Rd
index 27d1104..09b2737 100644
--- a/man/import_one_sce.Rd
+++ b/man/import_one_sce.Rd
@@ -3,6 +3,9 @@
 \name{import_one_sce}
 \alias{import_one_sce}
 \title{Import and process metadata and counts for a SingleCellExperiment object}
+\source{
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
+}
 \usage{
 import_one_sce(sce_obj, cache_dir = get_default_cache_dir())
 }
@@ -26,3 +29,9 @@ data(sample_sce_obj)
 import_one_sce(sample_sce_obj,
                cache_dir = get_default_cache_dir())
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
diff --git a/man/sample_sce_obj.Rd b/man/sample_sce_obj.Rd
index ffd7952..7eef3eb 100644
--- a/man/sample_sce_obj.Rd
+++ b/man/sample_sce_obj.Rd
@@ -9,6 +9,8 @@ An object of class \code{SingleCellExperiment}
 }
 \source{
 HeOrganAtlasData Liver
+
+\href{https://www.biorxiv.org/content/10.1101/2023.06.08.542671v3}{Mangiola et al.,2023}
 }
 \usage{
 sample_sce_obj
@@ -16,4 +18,10 @@ sample_sce_obj
 \description{
 A sample SingleCellExperiment object from HeOrganAtlasData with transformation in metadata and assay
 }
+\references{
+Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen,
+A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human
+immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06.
+doi:10.1101/2023.06.08.542671.
+}
 \keyword{datasets}