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1. adabmDCA adabmDCA Public

   adabmDCA 2.0 – a flexible but easy-to-use package for Direct Coupling Analysis

   7

2. arDCA arDCA Public

   auto-regressive Direct Coupling Analysis (arDCA) 2.0

   Python 1 1

3. Genie.jl Genie.jl Public

   Genie. jl is designed for implementing and analyzing evolutionary trajectories in protein evolution. It incorporates a data-driven model to simulate the effects of mutations, epistasis, and selecti…

   Julia

4. DELIGHT DELIGHT Public

   Code for the paper "Data augmentation enables label-specific generation of homologous protein sequences".

   Jupyter Notebook 3