Update README.md with project links

Author: jungheejung

README.md

@@ -1,2 +1,59 @@
-# spatialtopology.github.io
-Github pages for Spatial Topology
+
+table of contents
+- [github](#1-github)
+- [slack](#2-slack-channel)
+- [google drive](#3-google-drive--google-drive-)
+- [project management](#4-project-management)
+- [server](#5-server-dartfs-hpc)
+
+
+# Project Resources Dashboard
+
+## 1. Github 
+* Code [github.com/spatialtopology](github.com/spatialtopology)
+* * alignvideo: https://github.com/spatialtopology/alignvideos/releases/tag/v1.0.0-stable
+* * faces: https://github.com/spatialtopology/faces/releases
+* * fractional: https://github.com/spatialtopology/fractional_factorials/releases/tag/v.1.0.0
+* * narratives: https://github.com/spatialtopology/Narratives/releases/tag/v.1.0.0
+* * shortvideos: https://github.com/spatialtopology/shortvideos/releases/tag/v1.0.0-stable
+* * social: https://github.com/spatialtopology/social_influence/releases/tag/v1.0.0-stable
+* Behavioral https://github.com/spatialtopology/d_beh
+* Demographic data [[ redcap ]](https://redcap.dartmouth.edu/redcap_v9.9.0/index.php?pid=853)
+* README 
+
+## 2. Slack Channel   
+* `#spatial_topology`
+* `#spacetop_recruitment`
+
+## 3. Google Drive [[ google drive ]](https://drive.google.com/drive/folders/1hC8EEWQ5k54oWWkbssdCWg6--vCz4009?usp=sharing)
+* Manuscript files  [ insert link ]()
+* Data  [ insert link ]()
+
+## 4. Project Management 
+* Confluence https://spacetop.atlassian.net/wiki/
+* github.io https://spatialtopology.github.io
+* Scan notes [[ google sheets ]](https://docs.google.com/spreadsheets/d/1Sez4fIPbAL2AIRAdUudCBJRZDBp6LyHEdFJ2Yu0evVg/edit#gid=0)
+* scheduling RAs [[ google sheets ]](https://docs.google.com/spreadsheets/d/1lzKdYKuV5EAPDBnRkBatrxy8PEjTm3NjVM6ZYxHFkvw/edit#gid=121838173)
+
+## 5. Server (dartfs-hpc)
+
+### 5-1. Data path `/dartfs-hpc/rc/lab/C/CANlab/labdata/data/spacetop`
+#### Brain
+* DICOM `/dartfs-hpc/rc/lab/C/CANlab/labdata/data/spacetop/dartmouth/sourcedata`
+* BIDS formatted (nifti) `/dartfs-hpc/rc/lab/C/CANlab/labdata/data/spacetop/dartmouth`
+* Fmriprep / preprocessed `/dartfs-hpc/rc/lab/C/CANlab/labdata/data/spacetop/derivatives/dartmouth/fmriprep/fmriprep`
+#### Behavioral
+* Raw behavioral data https://github.com/spatialtopology/d_beh
+* Cleaned behavioral data 
+*  * social: `https://github.com/jungheejung/social_influence_analysis/tree/main/data/dartmouth/d01_rawbeh`
+#### Physio / video data
+* Raw Physio / video data `/dartfs-hpc/rc/lab/C/CANlab/labdata/data/spacetop/biopac/dartmouth/rawdata`
+* Cleaned behavioral data `insert path`
+#### Heroku / cloud
+
+
+### 5-2. Projects path 
+#### social `/dartfs-hpc/rc/lab/C/CANlab/labdata/projects/spacetop/social`
+* To be changed: `…CANlab/labdata/projects/spacetop_projects_social`
+* 1st level analyses `/dartfs-hpc/rc/lab/C/CANlab/labdata/projects/spacetop/social/analysis/fmri/spm/model-01_CcEScaA/1stLevel`
+* 2nd level analyses `/dartfs-hpc/rc/lab/C/CANlab/labdata/projects/spacetop/social/analysis/fmri/spm/model-01_CcEScaA/2ndLevel`