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telescopeMay_0deg.sh
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#! /bin/bash
###WAVEFORM ANALYSIS: WF-Exponential or METHOD2
###
###either fast hits or all hits can be choosen for the analysis.
#DUT="./dut-280415-13-14-16-17-18-19-20-30-1-2-3-4"
#RCE="./run13/cosmic_000013"
#ALIG=./run13/cosmic_000013.root
RCE="./cosmic_005117"
ALIG=/Users/Administrador/Documents/JudithFEI4_V2_May2015/cosmic_005117.root
echo "-------------------JUDITH VERSION 1.1 ---> chi2 align ON"
echo "0 TILT---MAY2015"
#echo "-------------------syncronization"
#./Judith -c synchronize -i $RCE.root -o $RCE-sync.root -I $DUT.root -O $DUT-sync.root -r configs/reforig_May2015_0deg.cfg -d configs/dutXfab.cfg -t configs/globalorig.cfg
echo "-------------------CoarseAlign telescope"
./Judith -c coarseAlign -i $ALIG -r configs/reforig_May2015_0deg.cfg -t configs/globalorig_May2015.cfg
echo "-------------------FineAlign telescope"
./Judith -c Chi2Align -i $ALIG -r configs/reforig_May2015_0deg.cfg -t configs/globalorig_May2015.cfg -n 20000
#echo "-------------------CoarseAlign dut"
#./Judith -c coarseAlignDUT -i $RCE-sync.root -I $DUT-sync.root -r configs/reforig_May2015_0deg.cfg -t configs/globalorig.cfg -d configs/dutXfab.cfg
#echo "-------------------FineAlign dut"
#./Judith -c fineAlignDUT -i $RCE-sync.root -I $DUT-sync.root -t configs/globalorig.cfg -r configs/reforig_May2015_0deg.cfg -d configs/dutXfab.cfg
echo "-------------------process telescope"
./Judith -c process -i $RCE.root -o $RCE-0deg-proc.root -r configs/reforig_May2015_0deg.cfg -t configs/globalorig_May2015.cfg -R $RCE-0deg-proc-result.root -n 300000
#echo "-------------------process dut"
#./Judith -c process -i $DUT-sync.root -o $DUT-sync-proc.root -r configs/dutXfab.cfg -t configs/globalorig.cfg -R $DUT-sync-proc-result.root
echo "-------------------Analysis telescope"
./Judith -c analysis -i $RCE-0deg-proc.root -r configs/reforig_May2015_0deg.cfg -t configs/globalorig_May2015.cfg -R $RCE-0deg-analysis-result.root -n 300000
#echo "-------------------Analysis dut"
#./Judith -c analysisDUT -i $RCE-sync-proc.root -I $DUT-sync-proc.root -r configs/reforig_May2015_0deg.cfg -d configs/dutXfab.cfg -t configs/globalorig.cfg -R $DUT-analysis-result.root