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Random crash on termination of cluster job

bugSomething isn't workingSomething isn't working

Status: Open.

#3908 In snakemake/snakemake;

· nicolamori opened on Jan 7, 2026

ValueError on nested config overrides: CLI identifier Regex excludes colons (Snakemake 8.17+)

bugSomething isn't workingSomething isn't working

Status: Open.

#3907 In snakemake/snakemake;

· durr1602 opened on Jan 6, 2026

Snakemake reports should fit images by both height and width by default

bugSomething isn't workingSomething isn't working

Status: Open.

#3906 In snakemake/snakemake;

· irm-codebase opened on Jan 6, 2026

Please investigate and comment on CVE-2025-66648 in Vega

Status: Open.

#3905 In snakemake/snakemake;

· musicinmybrain opened on Jan 6, 2026

Add wildcard information to group job log names/folder structure

enhancementNew feature or requestNew feature or request

Status: Open.

#3902 In snakemake/snakemake;

· ifariasg opened on Jan 3, 2026

Access restart attempts within params

enhancementNew feature or requestNew feature or request

Status: Open.

#3899 In snakemake/snakemake;

· chrarnold opened on Dec 25, 2025

Combining False/True values ​​for retrieving storage on connected DAG nodes can lead to unexpected file deletion.

bugSomething isn't workingSomething isn't working

Status: Open.

#3898 In snakemake/snakemake;

· cclienti opened on Dec 23, 2025

AttributeError, Can't get attribute 'AttributeGuard' when using notebook execution

bugSomething isn't workingSomething isn't working

Status: Open.

#3896 In snakemake/snakemake;

· arthur-e opened on Dec 22, 2025

params changes to not trigger re-run when params defined in lambda that depends on input

bugSomething isn't workingSomething isn't working

Status: Open.

#3895 In snakemake/snakemake;

· jbloom opened on Dec 20, 2025

Bug: edge case when there is a huge shell command with shadow: 'minimal'

Status: Open.

#3891 In snakemake/snakemake;

· Hocnonsense opened on Dec 19, 2025

submission of the snakemake head job results in not continuing to submit new jobs after the first job finished

bugSomething isn't workingSomething isn't working

Status: Open.

#3890 In snakemake/snakemake;

· jd3234 opened on Dec 18, 2025

<code>__name__</code> is set to <code>None</code>

bugSomething isn't workingSomething isn't working

Status: Open.

#3887 In snakemake/snakemake;

· schaerfo opened on Dec 16, 2025