From c00f16e5e969c570fb479ed7c7634c13c6933efa Mon Sep 17 00:00:00 2001 From: shawnlaffan Date: Fri, 24 Sep 2021 16:22:12 +1000 Subject: [PATCH] Bump versions to 3.99_001 --- bin/BiodiverseGUI.pl | 2 +- bin/load_and_randomise.pl | 2 +- bin/load_and_randomise_wrapper.pl | 2 +- bin/run_randomisation.pl | 2 +- etc/bundles/GUI/lib/Task/Biodiverse.pm | 2 +- etc/bundles/NoGUI/lib/Task/Biodiverse/NoGUI.pm | 2 +- lib/App/Biodiverse.pm | 2 +- lib/Biodiverse/BaseData.pm | 2 +- lib/Biodiverse/BaseData/Exclusions.pm | 2 +- lib/Biodiverse/BaseData/Import.pm | 2 +- lib/Biodiverse/BaseData/ManageOutputs.pm | 2 +- lib/Biodiverse/BaseStruct.pm | 2 +- lib/Biodiverse/BaseStruct/Export.pm | 2 +- lib/Biodiverse/Cluster.pm | 2 +- lib/Biodiverse/Common.pm | 2 +- lib/Biodiverse/Config.pm | 2 +- lib/Biodiverse/ElementProperties.pm | 2 +- lib/Biodiverse/Exception.pm | 2 +- lib/Biodiverse/GUI/BasedataImport.pm | 2 +- lib/Biodiverse/GUI/Callbacks.pm | 2 +- lib/Biodiverse/GUI/CellPopup.pm | 2 +- lib/Biodiverse/GUI/DeleteElementProperties.pm | 2 +- lib/Biodiverse/GUI/Dendrogram.pm | 2 +- lib/Biodiverse/GUI/Exclusions.pm | 2 +- lib/Biodiverse/GUI/Export.pm | 2 +- lib/Biodiverse/GUI/GUIManager.pm | 2 +- lib/Biodiverse/GUI/Grid.pm | 2 +- lib/Biodiverse/GUI/Help.pm | 2 +- lib/Biodiverse/GUI/Legend.pm | 2 +- lib/Biodiverse/GUI/Manager/BaseDatas.pm | 2 +- lib/Biodiverse/GUI/MatrixGrid.pm | 2 +- lib/Biodiverse/GUI/MatrixImport.pm | 2 +- lib/Biodiverse/GUI/OpenDialog.pm | 2 +- lib/Biodiverse/GUI/Overlays.pm | 2 +- lib/Biodiverse/GUI/ParametersTable.pm | 2 +- lib/Biodiverse/GUI/PhylogenyImport.pm | 2 +- lib/Biodiverse/GUI/Popup.pm | 2 +- lib/Biodiverse/GUI/PopupObject.pm | 2 +- lib/Biodiverse/GUI/ProgressDialog.pm | 2 +- lib/Biodiverse/GUI/Project.pm | 2 +- lib/Biodiverse/GUI/RemapGUI.pm | 2 +- lib/Biodiverse/GUI/SpatialParams.pm | 2 +- lib/Biodiverse/GUI/Tabs/CalculationsTree.pm | 2 +- lib/Biodiverse/GUI/Tabs/Clustering.pm | 2 +- lib/Biodiverse/GUI/Tabs/Labels.pm | 2 +- lib/Biodiverse/GUI/Tabs/Outputs.pm | 2 +- lib/Biodiverse/GUI/Tabs/Randomise.pm | 2 +- lib/Biodiverse/GUI/Tabs/RegionGrower.pm | 2 +- lib/Biodiverse/GUI/Tabs/Spatial.pm | 2 +- lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm | 2 +- lib/Biodiverse/GUI/Tabs/Tab.pm | 2 +- lib/Biodiverse/GUI/YesNoCancel.pm | 2 +- lib/Biodiverse/Index.pm | 2 +- lib/Biodiverse/Indices.pm | 2 +- lib/Biodiverse/Indices/Endemism.pm | 2 +- lib/Biodiverse/Indices/GroupProperties.pm | 2 +- lib/Biodiverse/Indices/Hierarchical_Labels.pm | 2 +- lib/Biodiverse/Indices/Indices.pm | 2 +- lib/Biodiverse/Indices/LabelCounts.pm | 2 +- lib/Biodiverse/Indices/LabelProperties.pm | 2 +- lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm | 2 +- lib/Biodiverse/Indices/Matrix_Indices.pm | 2 +- lib/Biodiverse/Indices/Numeric_Labels.pm | 2 +- lib/Biodiverse/Indices/PhyloCom.pm | 2 +- lib/Biodiverse/Indices/Phylogenetic.pm | 2 +- lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm | 2 +- lib/Biodiverse/Indices/PhylogeneticRelative.pm | 2 +- lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm | 2 +- lib/Biodiverse/Indices/RWTurnover.pm | 2 +- lib/Biodiverse/Indices/Rarity.pm | 2 +- lib/Biodiverse/Indices/RichnessEstimation.pm | 2 +- lib/Biodiverse/Matrix.pm | 2 +- lib/Biodiverse/Matrix/Base.pm | 2 +- lib/Biodiverse/Matrix/LowMem.pm | 2 +- lib/Biodiverse/Metadata.pm | 2 +- lib/Biodiverse/Metadata/BaseStruct.pm | 2 +- lib/Biodiverse/Metadata/Export.pm | 2 +- lib/Biodiverse/Metadata/Indices.pm | 2 +- lib/Biodiverse/Metadata/Parameter.pm | 2 +- lib/Biodiverse/Metadata/Randomisation.pm | 2 +- lib/Biodiverse/Metadata/SpatialConditions.pm | 2 +- lib/Biodiverse/Progress.pm | 2 +- lib/Biodiverse/Randomise.pm | 2 +- lib/Biodiverse/Randomise/IndependentSwaps.pm | 2 ++ lib/Biodiverse/ReadNexus.pm | 2 +- lib/Biodiverse/RegionGrower.pm | 2 +- lib/Biodiverse/Remap.pm | 2 +- lib/Biodiverse/RemapGuesser.pm | 2 +- lib/Biodiverse/Spatial.pm | 2 +- lib/Biodiverse/SpatialConditions.pm | 2 +- lib/Biodiverse/SpatialConditions/DefQuery.pm | 2 +- lib/Biodiverse/SpatialConditions/SpCalc.pm | 2 +- lib/Biodiverse/SpatialParams.pm | 2 +- lib/Biodiverse/SpatialParams/DefQuery.pm | 2 +- lib/Biodiverse/Statistics.pm | 2 +- lib/Biodiverse/Tree.pm | 2 +- lib/Biodiverse/TreeNode.pm | 2 +- lib/Biodiverse/TreeNode/BootstrapBlock.pm | 2 +- lib/Biodiverse/Utilities.pm | 2 +- lib/BiodiverseX/Indices/IEI.pm | 2 +- lib/BiodiverseX/Indices/Phylogenetic.pm | 2 +- 101 files changed, 102 insertions(+), 100 deletions(-) diff --git a/bin/BiodiverseGUI.pl b/bin/BiodiverseGUI.pl index cbe91703b..90583d387 100755 --- a/bin/BiodiverseGUI.pl +++ b/bin/BiodiverseGUI.pl @@ -44,7 +44,7 @@ BEGIN #no warnings 'redefine'; no warnings 'once'; use English qw { -no_match_vars }; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; local $OUTPUT_AUTOFLUSH = 1; diff --git a/bin/load_and_randomise.pl b/bin/load_and_randomise.pl index 419f6299a..2d3e8b2d8 100644 --- a/bin/load_and_randomise.pl +++ b/bin/load_and_randomise.pl @@ -15,7 +15,7 @@ local $| = 1; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Config; diff --git a/bin/load_and_randomise_wrapper.pl b/bin/load_and_randomise_wrapper.pl index 7dc5fe9d6..dcc114a55 100644 --- a/bin/load_and_randomise_wrapper.pl +++ b/bin/load_and_randomise_wrapper.pl @@ -15,7 +15,7 @@ #use lib Path::Class::dir ( $Bin, '..', 'lib')->stringify; use rlib; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; # are we running as a PerlApp executable? my $perl_app_tool = $PerlApp::TOOL; diff --git a/bin/run_randomisation.pl b/bin/run_randomisation.pl index 428d35432..620357239 100644 --- a/bin/run_randomisation.pl +++ b/bin/run_randomisation.pl @@ -16,7 +16,7 @@ local $| = 1; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Config; use Biodiverse::BaseData; diff --git a/etc/bundles/GUI/lib/Task/Biodiverse.pm b/etc/bundles/GUI/lib/Task/Biodiverse.pm index 5643c4441..3165e3f4a 100644 --- a/etc/bundles/GUI/lib/Task/Biodiverse.pm +++ b/etc/bundles/GUI/lib/Task/Biodiverse.pm @@ -3,7 +3,7 @@ package Task::Biodiverse; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; 1; diff --git a/etc/bundles/NoGUI/lib/Task/Biodiverse/NoGUI.pm b/etc/bundles/NoGUI/lib/Task/Biodiverse/NoGUI.pm index 92958437d..e2da15395 100644 --- a/etc/bundles/NoGUI/lib/Task/Biodiverse/NoGUI.pm +++ b/etc/bundles/NoGUI/lib/Task/Biodiverse/NoGUI.pm @@ -3,7 +3,7 @@ package Task::Biodiverse::NoGUI; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; 1; diff --git a/lib/App/Biodiverse.pm b/lib/App/Biodiverse.pm index 596cca373..02b107d3f 100644 --- a/lib/App/Biodiverse.pm +++ b/lib/App/Biodiverse.pm @@ -3,7 +3,7 @@ package App::Biodiverse; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; 1; diff --git a/lib/Biodiverse/BaseData.pm b/lib/Biodiverse/BaseData.pm index 9809dd8ef..3889e0d99 100644 --- a/lib/Biodiverse/BaseData.pm +++ b/lib/Biodiverse/BaseData.pm @@ -48,7 +48,7 @@ use Biodiverse::Indices; use Biodiverse::Metadata::Parameter; my $parameter_metadata_class = 'Biodiverse::Metadata::Parameter'; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw { Biodiverse::Common diff --git a/lib/Biodiverse/BaseData/Exclusions.pm b/lib/Biodiverse/BaseData/Exclusions.pm index 21762ccd8..8c788a43d 100644 --- a/lib/Biodiverse/BaseData/Exclusions.pm +++ b/lib/Biodiverse/BaseData/Exclusions.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Carp; use Scalar::Util qw /looks_like_number blessed reftype/; diff --git a/lib/Biodiverse/BaseData/Import.pm b/lib/Biodiverse/BaseData/Import.pm index 1f17906a3..e0eb5af30 100644 --- a/lib/Biodiverse/BaseData/Import.pm +++ b/lib/Biodiverse/BaseData/Import.pm @@ -4,7 +4,7 @@ use warnings; use 5.022; use English qw { -no_match_vars }; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Metadata::Parameter; my $parameter_metadata_class = 'Biodiverse::Metadata::Parameter'; diff --git a/lib/Biodiverse/BaseData/ManageOutputs.pm b/lib/Biodiverse/BaseData/ManageOutputs.pm index 237a77279..fd2f8933a 100644 --- a/lib/Biodiverse/BaseData/ManageOutputs.pm +++ b/lib/Biodiverse/BaseData/ManageOutputs.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Carp; use Scalar::Util qw /looks_like_number blessed reftype/; diff --git a/lib/Biodiverse/BaseStruct.pm b/lib/Biodiverse/BaseStruct.pm index 17cff2b2a..b42961a53 100644 --- a/lib/Biodiverse/BaseStruct.pm +++ b/lib/Biodiverse/BaseStruct.pm @@ -27,7 +27,7 @@ use Sort::Key::Natural qw /natsort rnatsort/; use constant HAVE_DATA_RECURSIVE => !$ENV{BD_NO_USE_PANDA} && eval 'require Data::Recursive'; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $EMPTY_STRING = q{}; diff --git a/lib/Biodiverse/BaseStruct/Export.pm b/lib/Biodiverse/BaseStruct/Export.pm index cc8f1f041..d3b2a6e99 100644 --- a/lib/Biodiverse/BaseStruct/Export.pm +++ b/lib/Biodiverse/BaseStruct/Export.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Carp; use English ( -no_match_vars ); diff --git a/lib/Biodiverse/Cluster.pm b/lib/Biodiverse/Cluster.pm index 2ed206821..34ca0a3b1 100644 --- a/lib/Biodiverse/Cluster.pm +++ b/lib/Biodiverse/Cluster.pm @@ -3,7 +3,7 @@ package Biodiverse::Cluster; use 5.010; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Carp; use strict; diff --git a/lib/Biodiverse/Common.pm b/lib/Biodiverse/Common.pm index cf54f648f..7a1f0f25b 100644 --- a/lib/Biodiverse/Common.pm +++ b/lib/Biodiverse/Common.pm @@ -47,7 +47,7 @@ use Biodiverse::Exception; require Clone; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $EMPTY_STRING = q{}; diff --git a/lib/Biodiverse/Config.pm b/lib/Biodiverse/Config.pm index 122db531b..cbcc298e7 100644 --- a/lib/Biodiverse/Config.pm +++ b/lib/Biodiverse/Config.pm @@ -18,7 +18,7 @@ use Ref::Util qw { :all }; use English ( -no_match_vars ); -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; #use Exporter; #use Devel::Symdump; diff --git a/lib/Biodiverse/ElementProperties.pm b/lib/Biodiverse/ElementProperties.pm index b333ae135..ae7199eb1 100644 --- a/lib/Biodiverse/ElementProperties.pm +++ b/lib/Biodiverse/ElementProperties.pm @@ -7,7 +7,7 @@ use Scalar::Util qw/looks_like_number/; use Biodiverse::Exception; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw /Biodiverse::BaseStruct Biodiverse::Common/; #/ use Ref::Util qw { :all }; diff --git a/lib/Biodiverse/Exception.pm b/lib/Biodiverse/Exception.pm index 5f9f5eaca..4836de460 100644 --- a/lib/Biodiverse/Exception.pm +++ b/lib/Biodiverse/Exception.pm @@ -1,7 +1,7 @@ package Biodiverse::Exception; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Config; my ($bit_size, $prng_init_descr, $other_bit_size); diff --git a/lib/Biodiverse/GUI/BasedataImport.pm b/lib/Biodiverse/GUI/BasedataImport.pm index 7477d59a3..7a5b3f207 100644 --- a/lib/Biodiverse/GUI/BasedataImport.pm +++ b/lib/Biodiverse/GUI/BasedataImport.pm @@ -7,7 +7,7 @@ use English ( -no_match_vars ); use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use File::Basename; use Gtk2; diff --git a/lib/Biodiverse/GUI/Callbacks.pm b/lib/Biodiverse/GUI/Callbacks.pm index 7c37329b2..b9ffcccc9 100644 --- a/lib/Biodiverse/GUI/Callbacks.pm +++ b/lib/Biodiverse/GUI/Callbacks.pm @@ -7,7 +7,7 @@ use English ( -no_match_vars ); use Browser::Start qw( open_url ); # needed for the about dialogue -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use constant FALSE => 0; use constant TRUE => 1; diff --git a/lib/Biodiverse/GUI/CellPopup.pm b/lib/Biodiverse/GUI/CellPopup.pm index 63a12878d..6aec7ccee 100644 --- a/lib/Biodiverse/GUI/CellPopup.pm +++ b/lib/Biodiverse/GUI/CellPopup.pm @@ -11,7 +11,7 @@ use Sort::Key::Natural qw /natsort/; use Ref::Util qw /is_ref is_arrayref is_hashref/; use Biodiverse::Utilities qw/sort_list_with_tree_names_aa/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Gtk2; diff --git a/lib/Biodiverse/GUI/DeleteElementProperties.pm b/lib/Biodiverse/GUI/DeleteElementProperties.pm index 1c9294f9a..723ecbdf8 100644 --- a/lib/Biodiverse/GUI/DeleteElementProperties.pm +++ b/lib/Biodiverse/GUI/DeleteElementProperties.pm @@ -5,7 +5,7 @@ use strict; use warnings; use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Gtk2; #use Biodiverse::RemapGuesser qw/guess_remap/; diff --git a/lib/Biodiverse/GUI/Dendrogram.pm b/lib/Biodiverse/GUI/Dendrogram.pm index 3137178d2..32bcc3c84 100644 --- a/lib/Biodiverse/GUI/Dendrogram.pm +++ b/lib/Biodiverse/GUI/Dendrogram.pm @@ -17,7 +17,7 @@ use Gtk2; use Gnome2::Canvas; use POSIX qw /ceil/; # for ceil() -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; use Biodiverse::TreeNode; diff --git a/lib/Biodiverse/GUI/Exclusions.pm b/lib/Biodiverse/GUI/Exclusions.pm index 40eab4463..91b4cc31f 100644 --- a/lib/Biodiverse/GUI/Exclusions.pm +++ b/lib/Biodiverse/GUI/Exclusions.pm @@ -8,7 +8,7 @@ use Carp; use Gtk2; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::ParametersTable; diff --git a/lib/Biodiverse/GUI/Export.pm b/lib/Biodiverse/GUI/Export.pm index e55d5dcf5..860449b8c 100644 --- a/lib/Biodiverse/GUI/Export.pm +++ b/lib/Biodiverse/GUI/Export.pm @@ -15,7 +15,7 @@ use Cwd; use List::MoreUtils qw /any none/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::ParametersTable; diff --git a/lib/Biodiverse/GUI/GUIManager.pm b/lib/Biodiverse/GUI/GUIManager.pm index 35702f86a..1d83337a3 100644 --- a/lib/Biodiverse/GUI/GUIManager.pm +++ b/lib/Biodiverse/GUI/GUIManager.pm @@ -6,7 +6,7 @@ use 5.010; #use Data::Structure::Util qw /has_circular_ref get_refs/; # hunting for circular refs -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; #use Data::Dumper; use Carp; diff --git a/lib/Biodiverse/GUI/Grid.pm b/lib/Biodiverse/GUI/Grid.pm index ddc493aff..e0679a1f3 100644 --- a/lib/Biodiverse/GUI/Grid.pm +++ b/lib/Biodiverse/GUI/Grid.pm @@ -20,7 +20,7 @@ use Tree::R; use Geo::ShapeFile; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::CellPopup; diff --git a/lib/Biodiverse/GUI/Help.pm b/lib/Biodiverse/GUI/Help.pm index 0a9e61c70..aec005aa9 100644 --- a/lib/Biodiverse/GUI/Help.pm +++ b/lib/Biodiverse/GUI/Help.pm @@ -17,7 +17,7 @@ require IO::Socket::SSL; use Biodiverse::GUI::YesNoCancel; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; ############################################## # Web links. diff --git a/lib/Biodiverse/GUI/Legend.pm b/lib/Biodiverse/GUI/Legend.pm index dcafa097a..c4e45364b 100644 --- a/lib/Biodiverse/GUI/Legend.pm +++ b/lib/Biodiverse/GUI/Legend.pm @@ -20,7 +20,7 @@ use Tree::R; #use Geo::ShapeFile; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::CellPopup; diff --git a/lib/Biodiverse/GUI/Manager/BaseDatas.pm b/lib/Biodiverse/GUI/Manager/BaseDatas.pm index ff0992720..84d24527f 100644 --- a/lib/Biodiverse/GUI/Manager/BaseDatas.pm +++ b/lib/Biodiverse/GUI/Manager/BaseDatas.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Carp; use Scalar::Util qw /blessed/; diff --git a/lib/Biodiverse/GUI/MatrixGrid.pm b/lib/Biodiverse/GUI/MatrixGrid.pm index 65c3bc64a..61a2fc2c1 100644 --- a/lib/Biodiverse/GUI/MatrixGrid.pm +++ b/lib/Biodiverse/GUI/MatrixGrid.pm @@ -15,7 +15,7 @@ use Carp; use POSIX qw /floor/; use List::Util qw /min max/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Gtk2; use Gnome2::Canvas; diff --git a/lib/Biodiverse/GUI/MatrixImport.pm b/lib/Biodiverse/GUI/MatrixImport.pm index 8892d6a9e..807628b5a 100644 --- a/lib/Biodiverse/GUI/MatrixImport.pm +++ b/lib/Biodiverse/GUI/MatrixImport.pm @@ -8,7 +8,7 @@ use Ref::Util qw { :all }; use Gtk2; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::Project; use Biodiverse::GUI::BasedataImport diff --git a/lib/Biodiverse/GUI/OpenDialog.pm b/lib/Biodiverse/GUI/OpenDialog.pm index 79422e5a7..208f1e813 100644 --- a/lib/Biodiverse/GUI/OpenDialog.pm +++ b/lib/Biodiverse/GUI/OpenDialog.pm @@ -11,7 +11,7 @@ use Gtk2; use Cwd; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; use Ref::Util qw { :all }; diff --git a/lib/Biodiverse/GUI/Overlays.pm b/lib/Biodiverse/GUI/Overlays.pm index 268c622e5..800c01e3b 100644 --- a/lib/Biodiverse/GUI/Overlays.pm +++ b/lib/Biodiverse/GUI/Overlays.pm @@ -6,7 +6,7 @@ use Gtk2; #use Data::Dumper; use Geo::ShapeFile; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::Project; diff --git a/lib/Biodiverse/GUI/ParametersTable.pm b/lib/Biodiverse/GUI/ParametersTable.pm index d09095209..293175bdf 100644 --- a/lib/Biodiverse/GUI/ParametersTable.pm +++ b/lib/Biodiverse/GUI/ParametersTable.pm @@ -60,7 +60,7 @@ use Gtk2; use Carp; use English qw { -no_match_vars }; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::SpatialParams; diff --git a/lib/Biodiverse/GUI/PhylogenyImport.pm b/lib/Biodiverse/GUI/PhylogenyImport.pm index c1e13376a..5ee7ff451 100644 --- a/lib/Biodiverse/GUI/PhylogenyImport.pm +++ b/lib/Biodiverse/GUI/PhylogenyImport.pm @@ -13,7 +13,7 @@ use Biodiverse::GUI::BasedataImport; use Biodiverse::GUI::YesNoCancel; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::Project; diff --git a/lib/Biodiverse/GUI/Popup.pm b/lib/Biodiverse/GUI/Popup.pm index 54f63f0f2..209ce9df0 100644 --- a/lib/Biodiverse/GUI/Popup.pm +++ b/lib/Biodiverse/GUI/Popup.pm @@ -9,7 +9,7 @@ use Biodiverse::Utilities qw/sort_list_with_tree_names_aa/; use Gtk2; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use English qw { -no_match_vars }; diff --git a/lib/Biodiverse/GUI/PopupObject.pm b/lib/Biodiverse/GUI/PopupObject.pm index 70738e54f..d0f0ed9c8 100644 --- a/lib/Biodiverse/GUI/PopupObject.pm +++ b/lib/Biodiverse/GUI/PopupObject.pm @@ -3,7 +3,7 @@ package Biodiverse::GUI::PopupObject; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Gtk2; diff --git a/lib/Biodiverse/GUI/ProgressDialog.pm b/lib/Biodiverse/GUI/ProgressDialog.pm index d23d58892..9630681e9 100644 --- a/lib/Biodiverse/GUI/ProgressDialog.pm +++ b/lib/Biodiverse/GUI/ProgressDialog.pm @@ -17,7 +17,7 @@ use Time::HiRes qw/time/; require Biodiverse::Config; my $progress_update_interval = $Biodiverse::Config::progress_update_interval; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $TRUE = 'TRUE'; my $FALSE = 'FALSE'; diff --git a/lib/Biodiverse/GUI/Project.pm b/lib/Biodiverse/GUI/Project.pm index 75f73bc5b..81d878e4a 100644 --- a/lib/Biodiverse/GUI/Project.pm +++ b/lib/Biodiverse/GUI/Project.pm @@ -15,7 +15,7 @@ use Ref::Util qw { :all }; use English ( -no_match_vars ); -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; require Exporter; use parent qw/Exporter Biodiverse::Common/; diff --git a/lib/Biodiverse/GUI/RemapGUI.pm b/lib/Biodiverse/GUI/RemapGUI.pm index 63958dcf3..8991c5a6b 100644 --- a/lib/Biodiverse/GUI/RemapGUI.pm +++ b/lib/Biodiverse/GUI/RemapGUI.pm @@ -4,7 +4,7 @@ use 5.010; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Gtk2; use Biodiverse::RemapGuesser qw/guess_remap/; diff --git a/lib/Biodiverse/GUI/SpatialParams.pm b/lib/Biodiverse/GUI/SpatialParams.pm index 264036143..ee5e70f3e 100644 --- a/lib/Biodiverse/GUI/SpatialParams.pm +++ b/lib/Biodiverse/GUI/SpatialParams.pm @@ -21,7 +21,7 @@ use Carp; use English qw { -no_match_vars }; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Glib; use Gtk2; diff --git a/lib/Biodiverse/GUI/Tabs/CalculationsTree.pm b/lib/Biodiverse/GUI/Tabs/CalculationsTree.pm index b3d35547a..d59ebb46e 100644 --- a/lib/Biodiverse/GUI/Tabs/CalculationsTree.pm +++ b/lib/Biodiverse/GUI/Tabs/CalculationsTree.pm @@ -19,7 +19,7 @@ use Biodiverse::Indices; use Ref::Util qw { :all }; use Text::Wrapper; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; #use Readonly; my $i; diff --git a/lib/Biodiverse/GUI/Tabs/Clustering.pm b/lib/Biodiverse/GUI/Tabs/Clustering.pm index 837400c45..0be45a029 100644 --- a/lib/Biodiverse/GUI/Tabs/Clustering.pm +++ b/lib/Biodiverse/GUI/Tabs/Clustering.pm @@ -25,7 +25,7 @@ use Biodiverse::GUI::Tabs::CalculationsTree; use Biodiverse::Indices; use Biodiverse::Utilities qw/sort_list_with_tree_names_aa/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Cluster; use Biodiverse::RegionGrower; diff --git a/lib/Biodiverse/GUI/Tabs/Labels.pm b/lib/Biodiverse/GUI/Tabs/Labels.pm index 5f136681d..f711db731 100644 --- a/lib/Biodiverse/GUI/Tabs/Labels.pm +++ b/lib/Biodiverse/GUI/Tabs/Labels.pm @@ -27,7 +27,7 @@ use Biodiverse::GUI::Overlays; use Biodiverse::Metadata::Parameter; my $parameter_metadata_class = 'Biodiverse::Metadata::Parameter'; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw { Biodiverse::GUI::Tabs::Tab diff --git a/lib/Biodiverse/GUI/Tabs/Outputs.pm b/lib/Biodiverse/GUI/Tabs/Outputs.pm index 05f1d833f..dad07435f 100644 --- a/lib/Biodiverse/GUI/Tabs/Outputs.pm +++ b/lib/Biodiverse/GUI/Tabs/Outputs.pm @@ -13,7 +13,7 @@ use Biodiverse::GUI::Export; use English ( -no_match_vars ); -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw {Biodiverse::GUI::Tabs::Tab}; diff --git a/lib/Biodiverse/GUI/Tabs/Randomise.pm b/lib/Biodiverse/GUI/Tabs/Randomise.pm index 879136845..2d2b53a5a 100644 --- a/lib/Biodiverse/GUI/Tabs/Randomise.pm +++ b/lib/Biodiverse/GUI/Tabs/Randomise.pm @@ -9,7 +9,7 @@ use English ( -no_match_vars ); use Gtk2; use Biodiverse::Randomise; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::Project; diff --git a/lib/Biodiverse/GUI/Tabs/RegionGrower.pm b/lib/Biodiverse/GUI/Tabs/RegionGrower.pm index 1c7d33d33..7bf5690d5 100644 --- a/lib/Biodiverse/GUI/Tabs/RegionGrower.pm +++ b/lib/Biodiverse/GUI/Tabs/RegionGrower.pm @@ -5,7 +5,7 @@ package Biodiverse::GUI::Tabs::RegionGrower; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw / Biodiverse::GUI::Tabs::Clustering diff --git a/lib/Biodiverse/GUI/Tabs/Spatial.pm b/lib/Biodiverse/GUI/Tabs/Spatial.pm index 63093eb65..3ae2b616e 100644 --- a/lib/Biodiverse/GUI/Tabs/Spatial.pm +++ b/lib/Biodiverse/GUI/Tabs/Spatial.pm @@ -5,7 +5,7 @@ use warnings; use English ( -no_match_vars ); -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Gtk2; use Carp; diff --git a/lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm b/lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm index 2b9ac14d4..3d2a10367 100644 --- a/lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm +++ b/lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm @@ -5,7 +5,7 @@ use 5.010; use English ( -no_match_vars ); -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Gtk2; use Carp; diff --git a/lib/Biodiverse/GUI/Tabs/Tab.pm b/lib/Biodiverse/GUI/Tabs/Tab.pm index 262d9fd0c..9f18fbe32 100644 --- a/lib/Biodiverse/GUI/Tabs/Tab.pm +++ b/lib/Biodiverse/GUI/Tabs/Tab.pm @@ -3,7 +3,7 @@ use strict; use warnings; use 5.010; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use List::Util qw/min max/; use Scalar::Util qw /blessed/; diff --git a/lib/Biodiverse/GUI/YesNoCancel.pm b/lib/Biodiverse/GUI/YesNoCancel.pm index a2f449d93..433b81202 100644 --- a/lib/Biodiverse/GUI/YesNoCancel.pm +++ b/lib/Biodiverse/GUI/YesNoCancel.pm @@ -7,7 +7,7 @@ use Gtk2; use English ( -no_match_vars ); -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::GUI::GUIManager; diff --git a/lib/Biodiverse/Index.pm b/lib/Biodiverse/Index.pm index a54b9d376..e87c086df 100644 --- a/lib/Biodiverse/Index.pm +++ b/lib/Biodiverse/Index.pm @@ -29,7 +29,7 @@ use Ref::Util qw { :all }; use Biodiverse::Progress; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw /Biodiverse::Common/; diff --git a/lib/Biodiverse/Indices.pm b/lib/Biodiverse/Indices.pm index 82c931769..9dc72db68 100644 --- a/lib/Biodiverse/Indices.pm +++ b/lib/Biodiverse/Indices.pm @@ -21,7 +21,7 @@ use Class::Inspector; use Biodiverse::Exception; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $EMPTY_STRING = q{}; diff --git a/lib/Biodiverse/Indices/Endemism.pm b/lib/Biodiverse/Indices/Endemism.pm index e1d412c8d..0b58cac61 100644 --- a/lib/Biodiverse/Indices/Endemism.pm +++ b/lib/Biodiverse/Indices/Endemism.pm @@ -4,7 +4,7 @@ use warnings; use Carp; use 5.020; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/GroupProperties.pm b/lib/Biodiverse/Indices/GroupProperties.pm index ea18b5b53..1ffcc8ebd 100644 --- a/lib/Biodiverse/Indices/GroupProperties.pm +++ b/lib/Biodiverse/Indices/GroupProperties.pm @@ -8,7 +8,7 @@ use warnings; use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Statistics::Descriptive::PDL::SampleWeighted '0.11'; my $stats_class_weighted = 'Statistics::Descriptive::PDL::SampleWeighted'; diff --git a/lib/Biodiverse/Indices/Hierarchical_Labels.pm b/lib/Biodiverse/Indices/Hierarchical_Labels.pm index 76946b7b3..458080710 100644 --- a/lib/Biodiverse/Indices/Hierarchical_Labels.pm +++ b/lib/Biodiverse/Indices/Hierarchical_Labels.pm @@ -6,7 +6,7 @@ use warnings; use Scalar::Util qw /blessed/; use Biodiverse::Progress; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/Indices.pm b/lib/Biodiverse/Indices/Indices.pm index 33d89883c..ff30508af 100644 --- a/lib/Biodiverse/Indices/Indices.pm +++ b/lib/Biodiverse/Indices/Indices.pm @@ -11,7 +11,7 @@ use Ref::Util qw { :all }; use English ( -no_match_vars ); use Readonly; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Statistics; my $stats_class = 'Biodiverse::Statistics'; diff --git a/lib/Biodiverse/Indices/LabelCounts.pm b/lib/Biodiverse/Indices/LabelCounts.pm index 0af79d608..703b83c7a 100644 --- a/lib/Biodiverse/Indices/LabelCounts.pm +++ b/lib/Biodiverse/Indices/LabelCounts.pm @@ -5,7 +5,7 @@ use warnings; use 5.022; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Statistics; diff --git a/lib/Biodiverse/Indices/LabelProperties.pm b/lib/Biodiverse/Indices/LabelProperties.pm index 19ab85bc3..1194894a8 100644 --- a/lib/Biodiverse/Indices/LabelProperties.pm +++ b/lib/Biodiverse/Indices/LabelProperties.pm @@ -4,7 +4,7 @@ use warnings; use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Ref::Util qw { :all }; diff --git a/lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm b/lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm index c50db4eb1..b9f032af0 100644 --- a/lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm +++ b/lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm @@ -4,7 +4,7 @@ use warnings; use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/Matrix_Indices.pm b/lib/Biodiverse/Indices/Matrix_Indices.pm index 1b74c9f1d..cebd368d3 100644 --- a/lib/Biodiverse/Indices/Matrix_Indices.pm +++ b/lib/Biodiverse/Indices/Matrix_Indices.pm @@ -7,7 +7,7 @@ use warnings; use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; #use Statistics::Descriptive; #my $stats_class = 'Statistics::Descriptive::Full'; diff --git a/lib/Biodiverse/Indices/Numeric_Labels.pm b/lib/Biodiverse/Indices/Numeric_Labels.pm index 5412c5acf..17c5c6f42 100644 --- a/lib/Biodiverse/Indices/Numeric_Labels.pm +++ b/lib/Biodiverse/Indices/Numeric_Labels.pm @@ -8,7 +8,7 @@ use List::Util qw /sum min max/; use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Statistics; diff --git a/lib/Biodiverse/Indices/PhyloCom.pm b/lib/Biodiverse/Indices/PhyloCom.pm index 6c4b1d7d9..2f78a2a00 100644 --- a/lib/Biodiverse/Indices/PhyloCom.pm +++ b/lib/Biodiverse/Indices/PhyloCom.pm @@ -15,7 +15,7 @@ use Math::BigInt (); use feature 'refaliasing'; no warnings 'experimental::refaliasing'; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Matrix::LowMem; my $mx_class_for_trees = 'Biodiverse::Matrix::LowMem'; diff --git a/lib/Biodiverse/Indices/Phylogenetic.pm b/lib/Biodiverse/Indices/Phylogenetic.pm index 080c94fc6..ea2219eb2 100644 --- a/lib/Biodiverse/Indices/Phylogenetic.pm +++ b/lib/Biodiverse/Indices/Phylogenetic.pm @@ -16,7 +16,7 @@ use Biodiverse::Progress; use List::Util 1.33 qw /any sum min max/; use Scalar::Util qw /blessed/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use constant HAVE_BD_UTILS => eval 'require Biodiverse::Utils'; diff --git a/lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm b/lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm index a2ef62fce..7093fff71 100644 --- a/lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm +++ b/lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm @@ -2,7 +2,7 @@ package Biodiverse::Indices::Phylogenetic::RefAlias; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use constant HAVE_PANDA_LIB => !$ENV{BD_NO_USE_PANDA} && eval 'require Panda::Lib'; diff --git a/lib/Biodiverse/Indices/PhylogeneticRelative.pm b/lib/Biodiverse/Indices/PhylogeneticRelative.pm index dc729447e..8e643ccfe 100644 --- a/lib/Biodiverse/Indices/PhylogeneticRelative.pm +++ b/lib/Biodiverse/Indices/PhylogeneticRelative.pm @@ -13,7 +13,7 @@ use parent qw /Biodiverse::Indices::PhylogeneticRelative::RefAlias/; use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm b/lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm index 13a1ae95c..bc82cfabb 100644 --- a/lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm +++ b/lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm @@ -2,7 +2,7 @@ package Biodiverse::Indices::PhylogeneticRelative::RefAlias; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use feature 'refaliasing'; no warnings 'experimental::refaliasing'; diff --git a/lib/Biodiverse/Indices/RWTurnover.pm b/lib/Biodiverse/Indices/RWTurnover.pm index d82b76518..e90cb6cf8 100644 --- a/lib/Biodiverse/Indices/RWTurnover.pm +++ b/lib/Biodiverse/Indices/RWTurnover.pm @@ -9,7 +9,7 @@ no warnings 'experimental::refaliasing'; use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/Rarity.pm b/lib/Biodiverse/Indices/Rarity.pm index ec1584b56..2881ef3dc 100644 --- a/lib/Biodiverse/Indices/Rarity.pm +++ b/lib/Biodiverse/Indices/Rarity.pm @@ -3,7 +3,7 @@ use strict; use warnings; use 5.020; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; # we need access to one sub from Endemism.pm use parent qw /Biodiverse::Indices::Endemism/; diff --git a/lib/Biodiverse/Indices/RichnessEstimation.pm b/lib/Biodiverse/Indices/RichnessEstimation.pm index 91fdabab6..86c366f67 100644 --- a/lib/Biodiverse/Indices/RichnessEstimation.pm +++ b/lib/Biodiverse/Indices/RichnessEstimation.pm @@ -8,7 +8,7 @@ use Carp; use List::Util qw /max min sum/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Matrix.pm b/lib/Biodiverse/Matrix.pm index 51ec68e81..b748848b8 100644 --- a/lib/Biodiverse/Matrix.pm +++ b/lib/Biodiverse/Matrix.pm @@ -8,7 +8,7 @@ use strict; use warnings; use 5.010; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use English ( -no_match_vars ); diff --git a/lib/Biodiverse/Matrix/Base.pm b/lib/Biodiverse/Matrix/Base.pm index 5bdc59a6b..d01755cbf 100644 --- a/lib/Biodiverse/Matrix/Base.pm +++ b/lib/Biodiverse/Matrix/Base.pm @@ -9,7 +9,7 @@ use English qw / -no_match_vars/; use Scalar::Util qw /looks_like_number blessed/; use List::Util qw /min max sum/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Exception; use Ref::Util qw { :all }; diff --git a/lib/Biodiverse/Matrix/LowMem.pm b/lib/Biodiverse/Matrix/LowMem.pm index 5b1c60250..9bf3aa83a 100644 --- a/lib/Biodiverse/Matrix/LowMem.pm +++ b/lib/Biodiverse/Matrix/LowMem.pm @@ -6,7 +6,7 @@ use warnings; use Carp; use List::Util qw /min max/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Matrix; use Biodiverse::Exception; diff --git a/lib/Biodiverse/Metadata.pm b/lib/Biodiverse/Metadata.pm index 1c81846bb..00a31af90 100644 --- a/lib/Biodiverse/Metadata.pm +++ b/lib/Biodiverse/Metadata.pm @@ -4,7 +4,7 @@ use strict; use warnings; use Ref::Util qw { :all }; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; sub new { my ($class, $data) = @_; diff --git a/lib/Biodiverse/Metadata/BaseStruct.pm b/lib/Biodiverse/Metadata/BaseStruct.pm index e812bc462..9f847ef90 100644 --- a/lib/Biodiverse/Metadata/BaseStruct.pm +++ b/lib/Biodiverse/Metadata/BaseStruct.pm @@ -5,7 +5,7 @@ use 5.016; use Carp; use Readonly; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw /Biodiverse::Metadata/; diff --git a/lib/Biodiverse/Metadata/Export.pm b/lib/Biodiverse/Metadata/Export.pm index 6a7dc18e8..62746a0e0 100644 --- a/lib/Biodiverse/Metadata/Export.pm +++ b/lib/Biodiverse/Metadata/Export.pm @@ -6,7 +6,7 @@ use 5.016; use Carp; use Readonly; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw /Biodiverse::Metadata/; diff --git a/lib/Biodiverse/Metadata/Indices.pm b/lib/Biodiverse/Metadata/Indices.pm index 960e5565d..be0341230 100644 --- a/lib/Biodiverse/Metadata/Indices.pm +++ b/lib/Biodiverse/Metadata/Indices.pm @@ -7,7 +7,7 @@ use Readonly; use parent qw /Biodiverse::Metadata/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; Readonly my %methods_and_defaults => ( name => 'no_name', diff --git a/lib/Biodiverse/Metadata/Parameter.pm b/lib/Biodiverse/Metadata/Parameter.pm index 3a42cc41a..946fb8d34 100644 --- a/lib/Biodiverse/Metadata/Parameter.pm +++ b/lib/Biodiverse/Metadata/Parameter.pm @@ -11,7 +11,7 @@ use Readonly; use parent qw /Biodiverse::Metadata/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; # Poss too many, but we are a catch-all class. diff --git a/lib/Biodiverse/Metadata/Randomisation.pm b/lib/Biodiverse/Metadata/Randomisation.pm index a525e37f8..20c0a1a3a 100644 --- a/lib/Biodiverse/Metadata/Randomisation.pm +++ b/lib/Biodiverse/Metadata/Randomisation.pm @@ -7,7 +7,7 @@ use Readonly; use parent qw /Biodiverse::Metadata/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my %methods_and_defaults = ( diff --git a/lib/Biodiverse/Metadata/SpatialConditions.pm b/lib/Biodiverse/Metadata/SpatialConditions.pm index 30c03efcd..38403ffeb 100644 --- a/lib/Biodiverse/Metadata/SpatialConditions.pm +++ b/lib/Biodiverse/Metadata/SpatialConditions.pm @@ -6,7 +6,7 @@ use Carp; use Readonly; use Clone qw /clone/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw /Biodiverse::Metadata/; diff --git a/lib/Biodiverse/Progress.pm b/lib/Biodiverse/Progress.pm index 967a7148f..88985e38d 100644 --- a/lib/Biodiverse/Progress.pm +++ b/lib/Biodiverse/Progress.pm @@ -10,7 +10,7 @@ my $NULL_STRING = q//; require Biodiverse::Config; use Biodiverse::Exception; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; sub new { my $class = shift; diff --git a/lib/Biodiverse/Randomise.pm b/lib/Biodiverse/Randomise.pm index 971aa2dc4..8a9430934 100644 --- a/lib/Biodiverse/Randomise.pm +++ b/lib/Biodiverse/Randomise.pm @@ -44,7 +44,7 @@ my $parameter_rand_metadata_class = 'Biodiverse::Metadata::Parameter'; require Biodiverse::BaseData; use Biodiverse::Progress; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $EMPTY_STRING = q{}; diff --git a/lib/Biodiverse/Randomise/IndependentSwaps.pm b/lib/Biodiverse/Randomise/IndependentSwaps.pm index 9937f1151..3b4daaf8e 100644 --- a/lib/Biodiverse/Randomise/IndependentSwaps.pm +++ b/lib/Biodiverse/Randomise/IndependentSwaps.pm @@ -6,6 +6,8 @@ use strict; use warnings; use 5.022; +our $VERSION = '3.99_001'; + use experimental 'refaliasing'; no warnings 'experimental::refaliasing'; diff --git a/lib/Biodiverse/ReadNexus.pm b/lib/Biodiverse/ReadNexus.pm index 9293b0cd8..ada638ed9 100644 --- a/lib/Biodiverse/ReadNexus.pm +++ b/lib/Biodiverse/ReadNexus.pm @@ -18,7 +18,7 @@ use Biodiverse::TreeNode; use Biodiverse::Exception; use Biodiverse::Progress; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw /Biodiverse::Common/; diff --git a/lib/Biodiverse/RegionGrower.pm b/lib/Biodiverse/RegionGrower.pm index a4350b94d..e39d0cdef 100644 --- a/lib/Biodiverse/RegionGrower.pm +++ b/lib/Biodiverse/RegionGrower.pm @@ -3,7 +3,7 @@ use 5.010; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw / Biodiverse::Cluster diff --git a/lib/Biodiverse/Remap.pm b/lib/Biodiverse/Remap.pm index 76dbd3622..4f8b3dd18 100644 --- a/lib/Biodiverse/Remap.pm +++ b/lib/Biodiverse/Remap.pm @@ -14,7 +14,7 @@ use Carp; use Ref::Util qw { :all }; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw /Biodiverse::ElementProperties/; diff --git a/lib/Biodiverse/RemapGuesser.pm b/lib/Biodiverse/RemapGuesser.pm index ab2a53f8e..ef0ffca95 100644 --- a/lib/Biodiverse/RemapGuesser.pm +++ b/lib/Biodiverse/RemapGuesser.pm @@ -16,7 +16,7 @@ use List::Util qw /min/; use Biodiverse::Progress; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; sub new { my $class = shift; diff --git a/lib/Biodiverse/Spatial.pm b/lib/Biodiverse/Spatial.pm index 248701da3..2fdae3a39 100644 --- a/lib/Biodiverse/Spatial.pm +++ b/lib/Biodiverse/Spatial.pm @@ -14,7 +14,7 @@ use List::Util 1.45 qw /first uniq/; use Time::HiRes qw /time/; use Ref::Util qw { :all }; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::SpatialConditions; use Biodiverse::SpatialConditions::DefQuery; diff --git a/lib/Biodiverse/SpatialConditions.pm b/lib/Biodiverse/SpatialConditions.pm index 92cecbb16..247d3dd70 100644 --- a/lib/Biodiverse/SpatialConditions.pm +++ b/lib/Biodiverse/SpatialConditions.pm @@ -27,7 +27,7 @@ use parent qw / Biodiverse::SpatialConditions::SpCalc /; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $metadata_class = 'Biodiverse::Metadata::SpatialConditions'; use Biodiverse::Metadata::SpatialConditions; diff --git a/lib/Biodiverse/SpatialConditions/DefQuery.pm b/lib/Biodiverse/SpatialConditions/DefQuery.pm index 6d3e7839a..52ca0ef99 100644 --- a/lib/Biodiverse/SpatialConditions/DefQuery.pm +++ b/lib/Biodiverse/SpatialConditions/DefQuery.pm @@ -9,7 +9,7 @@ use Carp; use parent qw /Biodiverse::SpatialParams Biodiverse::Common/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; our $NULL_STRING = q{}; diff --git a/lib/Biodiverse/SpatialConditions/SpCalc.pm b/lib/Biodiverse/SpatialConditions/SpCalc.pm index 63380c1e0..08f995431 100644 --- a/lib/Biodiverse/SpatialConditions/SpCalc.pm +++ b/lib/Biodiverse/SpatialConditions/SpCalc.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Carp; use English qw /-no_match_vars/; diff --git a/lib/Biodiverse/SpatialParams.pm b/lib/Biodiverse/SpatialParams.pm index d8f7f51aa..7eddc2a82 100644 --- a/lib/Biodiverse/SpatialParams.pm +++ b/lib/Biodiverse/SpatialParams.pm @@ -7,7 +7,7 @@ use warnings; # This is a stub for backwards compatibility. # All the content is now in Biodiverse::SpatialConditions -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use parent qw /Biodiverse::SpatialConditions/; diff --git a/lib/Biodiverse/SpatialParams/DefQuery.pm b/lib/Biodiverse/SpatialParams/DefQuery.pm index de9285f60..3c8b401dc 100644 --- a/lib/Biodiverse/SpatialParams/DefQuery.pm +++ b/lib/Biodiverse/SpatialParams/DefQuery.pm @@ -4,7 +4,7 @@ use 5.010; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; # This is a stub for backwards compatibility. # All the content is now in Biodiverse::SpatialConditions diff --git a/lib/Biodiverse/Statistics.pm b/lib/Biodiverse/Statistics.pm index a7c5a908b..7d9d1c4c3 100644 --- a/lib/Biodiverse/Statistics.pm +++ b/lib/Biodiverse/Statistics.pm @@ -3,7 +3,7 @@ package Biodiverse::Statistics; use strict; use warnings; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Carp; diff --git a/lib/Biodiverse/Tree.pm b/lib/Biodiverse/Tree.pm index fc0a693e8..63fc06c90 100644 --- a/lib/Biodiverse/Tree.pm +++ b/lib/Biodiverse/Tree.pm @@ -22,7 +22,7 @@ no warnings 'experimental::refaliasing'; use English qw ( -no_match_vars ); -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; our $AUTOLOAD; diff --git a/lib/Biodiverse/TreeNode.pm b/lib/Biodiverse/TreeNode.pm index ab36b924d..df6b6f4fc 100644 --- a/lib/Biodiverse/TreeNode.pm +++ b/lib/Biodiverse/TreeNode.pm @@ -23,7 +23,7 @@ use Biodiverse::TreeNode::BootstrapBlock; use parent qw /Biodiverse::Common/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $EMPTY_STRING = q{}; my $SPACE = q{ }; diff --git a/lib/Biodiverse/TreeNode/BootstrapBlock.pm b/lib/Biodiverse/TreeNode/BootstrapBlock.pm index 51606877f..4a0cabb84 100644 --- a/lib/Biodiverse/TreeNode/BootstrapBlock.pm +++ b/lib/Biodiverse/TreeNode/BootstrapBlock.pm @@ -14,7 +14,7 @@ use Ref::Util qw /is_arrayref is_hashref/; use parent qw /Biodiverse::Common/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; sub new { my $class = shift; diff --git a/lib/Biodiverse/Utilities.pm b/lib/Biodiverse/Utilities.pm index f1d9bc2e5..ab822fd12 100644 --- a/lib/Biodiverse/Utilities.pm +++ b/lib/Biodiverse/Utilities.pm @@ -7,7 +7,7 @@ use Carp; use Sort::Key::Natural qw /natsort/; use Ref::Util qw /:all/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; our @ISA = qw (Exporter); our @EXPORT = (); diff --git a/lib/BiodiverseX/Indices/IEI.pm b/lib/BiodiverseX/Indices/IEI.pm index 990ea5c68..1df62c291 100644 --- a/lib/BiodiverseX/Indices/IEI.pm +++ b/lib/BiodiverseX/Indices/IEI.pm @@ -8,7 +8,7 @@ use Ref::Util qw { :all }; use Carp; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; use Biodiverse::Statistics; my $stats_package = 'Biodiverse::Statistics'; diff --git a/lib/BiodiverseX/Indices/Phylogenetic.pm b/lib/BiodiverseX/Indices/Phylogenetic.pm index ab0b55ffe..ce8e1e89a 100644 --- a/lib/BiodiverseX/Indices/Phylogenetic.pm +++ b/lib/BiodiverseX/Indices/Phylogenetic.pm @@ -13,7 +13,7 @@ use Biodiverse::Progress; use List::Util 1.33 qw /any sum min max/; use Scalar::Util qw /blessed/; -our $VERSION = '3.1'; +our $VERSION = '3.99_001'; my $metadata_class = 'Biodiverse::Metadata::Indices';