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New format: BGEN

enhancementNew feature or requestNew feature or request

Status: Open.

#417 In sgkit-dev/bio2zarr;

· jeromekelleher opened on Aug 7, 2025

Add "overwrite" functionality to Python API

Status: Open.

#415 In sgkit-dev/bio2zarr;

· hyanwong opened on May 30, 2025

· 

0.1.7

Drop isolated_as_missing and contig_id arguments in tskit.convert

Status: Open.

#413 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 28, 2025

Documented VCZ writer API

enhancementNew feature or requestNew feature or request

Status: Open.

#412 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 23, 2025

Add Python API for plink

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#411 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 23, 2025

Add memory control options to plink and tskit CLIs

enhancementNew feature or requestNew feature or request

Status: Open.

#410 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 23, 2025

Optimise pandas usage for read_bim and read_fam

enhancementNew feature or requestNew feature or request

Status: Open.

#409 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 23, 2025

Improve Python API documention

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#407 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 23, 2025

Add support for coordinate handling in tskit

enhancementNew feature or requestNew feature or request

Status: Open.

#405 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 23, 2025

Review Format/Source API and make pickling requirements explicit

enhancementNew feature or requestNew feature or request

Status: Open.

#403 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 23, 2025

Haploids inconsistently marked as phased/unphased

Status: Open.

#399 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 22, 2025

Add contig_length to plink output

enhancementNew feature or requestNew feature or request

Status: Open.

#394 In sgkit-dev/bio2zarr;

· jeromekelleher opened on May 21, 2025