ratcortex-dwi-streams

Code to process dMRI volumes and create cortical streamlines in rat data. ℹ️ Info & details

Setup

Install the MINC tools required for the code:
```
sudo apt install minc-tools
```
Create a conda environment:
```
conda env create --file environment.yml
```
Activate the environment:
```
conda activate cx-streams-env
```
Display script help:
```
nii2streams.sh -h
```