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Commits on Feb 18, 2026

• restore n_jobs parameters (xenium) for backward compatibility

  LucaMarconato

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Commits on Feb 16, 2026

• improve _read_polygons slow on pandas 3 due to string conversion

  LucaMarconato

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• Fix parsing of xenium index (exclude old versions)

  LucaMarconato

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Commits on Feb 11, 2026

• avoid anndata index casting; compute xenium cell ids once

  LucaMarconato

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  722fa33

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• remove unnecessary cast to str for df index

  LucaMarconato

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• xenium cache zip store opening; vectorize xenium cell id encoding via bit shift

  LucaMarconato

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• Merge pull request #369 from scverse/fix/assert-xenium-shapes-id

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  LucaMarconato

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• update deps

  LucaMarconato

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• remove print

  LucaMarconato

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• remove num_workers from xenium; move normalize_chunks to spatialdata

  LucaMarconato

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Commits on Feb 9, 2026

• cleanup xenium _get_labels_and_indices_mapping()

  LucaMarconato

  committed
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Commits on Feb 7, 2026

• xenium: avoid calling get_element_instances() when the info is in the metadata; remove deprecaction warning

  LucaMarconato

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  9f1f713

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• attempt fix docs

  LucaMarconato

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Commits on Feb 6, 2026

• cleanup

  LucaMarconato

  committed
  eae5858

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• fix assert xenium shapes id

  LucaMarconato

  committed
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Commits on Feb 4, 2026

• Merge pull request #365 from scverse/performance/xenium-shapes-parsing

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  LucaMarconato

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• remove n_jobs from xenium cli

  LucaMarconato

  committed
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Commits on Feb 3, 2026

• remove print

  LucaMarconato

  committed
  7b73d33

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• faster xenium polygon parsing via ragged arrays

  LucaMarconato

  committed
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• Merge pull request #363 from scverse/performance/xenium-points-parsing

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  LucaMarconato

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• faster xenium points parsing by precomputing categories

  LucaMarconato

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Commits on Jan 31, 2026

• Merge pull request #360 from scverse/add-provenance-metadata

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  LucaMarconato

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Commits on Jan 30, 2026

• add spatialdata-io version and reader name to attrs

  LucaMarconato

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Commits on Jan 19, 2026

• Merge pull request #357 from scverse/pre-commit-ci-update-config

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  LucaMarconato

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Commits on Jan 18, 2026

• Merge pull request #279 from lucas-diedrich/image-reader-chunkwise

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  LucaMarconato

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• c=1 vs c=3 benchmark

  LucaMarconato

  committed
  355b695

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Commits on Jan 16, 2026

• fix pre-commit

  LucaMarconato

  committed
  4b4a00e

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• benchmark for image() with synthetic data

  LucaMarconato

  committed
  163d8b0

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• improve chunks support

  LucaMarconato

  committed
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• Merge pull request #349 from MSHelm/fix/macsima-cycle-parsing

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  LucaMarconato

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• wip fix chunks

  LucaMarconato

  committed
  a890951

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• Clarify data format specification

  MSHelm

  committed
  597dc71

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• fix pre-commit benchmark_image

  LucaMarconato

  committed
  5a20f41

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• Clarify documentation

  lucas-diedrich

  committed
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• chore: Remove Note and TODO

  lucas-diedrich

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