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Bug when using bonferroni

Triage 🩺This issue needs to be triaged by a maintainerThis issue needs to be triaged by a maintainer

Status: Open.

Bug

#3455 In scverse/scanpy;

· davidrm-bio opened on Jan 28, 2025

mean expression in group for plotting functions

Triage 🩺This issue needs to be triaged by a maintainerThis issue needs to be triaged by a maintainer

Status: Open.

Bug

#3454 In scverse/scanpy;

· davidrm-bio opened on Jan 28, 2025

feature selection method using pearson residuals discrepancies

Triage 🩺This issue needs to be triaged by a maintainerThis issue needs to be triaged by a maintainer

Status: Open.

Bug

#3452 In scverse/scanpy;

· jflucier opened on Jan 24, 2025

fast array utils spinoff package

Area – APIAPI designAPI design

MetaA meta-request to be implemented in multiple stepsA meta-request to be implemented in multiple steps

Status: Open.

Enhancement

#3449 In scverse/scanpy;

· flying-sheep opened on Jan 23, 2025

AttributeError: 'Series' object has no attribute 'nonzero' in sc.tl.filter_rank_genes_groups

Needs info❔More information neededMore information needed

Status: Open.

Bug

#3443 In scverse/scanpy;

· niuniudevp opened on Jan 19, 2025

UMAP redesign

Area - Topology 🍩Neighbor graphsNeighbor graphs

Area – APIAPI designAPI design

MetaA meta-request to be implemented in multiple stepsA meta-request to be implemented in multiple steps

Status: Open.

Enhancement

#3429 In scverse/scanpy;

· flying-sheep opened on Jan 9, 2025

Support for scipy.csr_array/scipy.csc_array

Status: Open.

Enhancement

#3423 In scverse/scanpy;

· alam-shahul opened on Jan 1, 2025

 ·  

1.12.0

UMAP implementation in igraph

Status: Open.

Enhancement

#3408 In scverse/scanpy;

· iosonofabio opened on Dec 18, 2024

Allow both 'on data' legend together with legend on righ-hand side of plot

Area - Plotting 🌺

Area – APIAPI designAPI design

Status: Open.

Enhancement

#3401 In scverse/scanpy;

· mumichae opened on Dec 13, 2024

mask_obs parameter modifies obs column when calling scatterplot

Area - Plotting 🌺

Status: Open.

Bug

#3400 In scverse/scanpy;

· mumichae opened on Dec 13, 2024

"Interactive" Dotplot version: check for available var_names

Area - Plotting 🌺

Status: Open.

Enhancement

#3387 In scverse/scanpy;

· FrancescaDr opened on Nov 25, 2024

Make _to_dense public?

Status: Open.

Enhancement

#3386 In scverse/scanpy;

· eroell opened on Nov 25, 2024