1.8.2.md

(v1.8.2)=

1.8.2 {small}2021-11-3

Documentation

• Update conda installation instructions {pr}1974 {smaller}L Heumos

Bug fixes

• Fix plotting after {func}scanpy.tl.filter_rank_genes_groups {pr}1942 {smaller}S Rybakov
• Fix use_raw=None using {attr}anndata.AnnData.var_names if {attr}anndata.AnnData.raw is present in {func}scanpy.tl.score_genes {pr}1999 {smaller}M Klein
• Fix compatibility with UMAP 0.5.2 {pr}2028 {smaller}L Mcinnes
• Fixed non-determinism in {func}scanpy.pl.paga node positions {pr}1922 {smaller}I Virshup

Ecosystem

• Added PASTE (a tool to align and integrate spatial transcriptomics data) to scanpy ecosystem.