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add developer API post #198
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#### Blog Post Template #### | ||||||
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#### Post Information #### | ||||||
title: "Changes and development of scikit-learn's developer API" | ||||||
date: December 12, 2024 | ||||||
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#### Post Category and Tags #### | ||||||
# Format in titlecase without dashes (Ex. "Open Source" instead of "open-source") | ||||||
categories: | ||||||
- Updates | ||||||
tags: | ||||||
- Open Source | ||||||
- Machine Learning | ||||||
- License | ||||||
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#### Featured Image #### | ||||||
featured-image: BSD_watermark.svg | ||||||
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#### Author Info #### | ||||||
# Can accomodate multiple authors | ||||||
# Add SQUARE Author Image to /assets/images/author_images/ folder | ||||||
postauthors: | ||||||
- name: Adrin Jalali | ||||||
website: https://adrin.info/ | ||||||
image: adrin-jalali.jpeg | ||||||
--- | ||||||
<div> | ||||||
<img src="/assets/images/posts_images/{{ page.featured-image }}" alt=""> | ||||||
{% include postauthor.html %} | ||||||
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Historically, scikit-learn's API has been divided into public and private. Public API is | ||||||
intended to be used by users, and private API is used internally in scikit-learn to | ||||||
develop new features and estimators. However, many of those functionalities have become | ||||||
essential to develop scikit-learn estimators by third parties who develop them outside | ||||||
the scikit-learn codebase. | ||||||
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When it comes to our public API, we have very strict and high standards on backward | ||||||
compatibility. The rule of thumb is that no change should cause a change in users' | ||||||
code unless we warn about it for two release cycles, which means we give users a year | ||||||
time to update their code. | ||||||
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On the other hand, we have no such guarantees or constraints on our private API. This | ||||||
brings an issue to third party developers who would like to use methods used by | ||||||
scikit-learn developers to develop their estimators. Constantly changing private API | ||||||
without prior warning brings certain challenges to third party developers which is not | ||||||
ideal. | ||||||
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As a result, we've been working on creating a developer API which would sit somewhere | ||||||
between our public and private API in terms of backward compatibility. That means we | ||||||
intend to try to keep that API stable, and if needed, introduce changes with one release | ||||||
cycle warning. | ||||||
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In the past few releases, we've slowly introduced more functionalities under this | ||||||
umbrella. `__sklearn_clone__` and `__sklearn_is_fitted__` are two examples. | ||||||
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In the latest release, at the time of writing this post, we focused on the testing | ||||||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. (not sure why i cant suggest a change directly) Should we just say "In the 1.6 release, we focussed on ..."? |
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infrasutructure and estimator tag system. Estimator tags used to be private, and we | ||||||
were not sure about their design. In the 1.6 release, new tags are introduced and | ||||||
using them looks like the following: | ||||||
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```python | ||||||
from sklearn.base import BaseEstimator, ClassifierMixin | ||||||
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class MyEstimator(ClassifierMixin, BaseEstimator): | ||||||
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... | ||||||
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def __sklearn_tags__(self): | ||||||
tags = super().__sklearn_tags__() | ||||||
# modify tags here | ||||||
tags.non_deterministic = True | ||||||
return tags | ||||||
``` | ||||||
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The new tags mostly follow the same structure as the old tags, but there are certain | ||||||
changes to them. The main change is that the old `_xfail_checks` is no more present | ||||||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. "is no more present" -> "is no longer present" |
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in the new tags. That tag was used to tell the common testing tools about the tests | ||||||
which are known to fail and are to be skipped. That information is now directly passed | ||||||
to the test functionalities. The old way of skipping a test was the following: | ||||||
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```python | ||||||
from sklearn.base import BaseEstimator, ClassifierMixin | ||||||
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class MyEstimator(ClassifierMixin, BaseEstimator): | ||||||
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... | ||||||
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def _more_tags(self): | ||||||
return { | ||||||
"_xfail_checks": { | ||||||
"check_to_skip_name": "this check is known to fail", | ||||||
... | ||||||
} | ||||||
} | ||||||
``` | ||||||
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And then when calling `check_estimator` or using `parametrize_with_checks` with `pytest` | ||||||
would automatically ignore those tests for the estimator. | ||||||
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Instead, in this release, you pass that information directly to those methods: | ||||||
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```python | ||||||
from sklearn.utils.estimator_checks import check_estimator, parametrize_with_checks | ||||||
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CHECKS_EXPECTED_TO_FAIL = { | ||||||
"check_to_skip_name": "this check is known to fail", | ||||||
... | ||||||
} | ||||||
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# Using check_estimator | ||||||
def test_with_check_estimator(): | ||||||
check_estimator(MyEstimator(), expected_failed_checks=CHECKS_EXPECTED_TO_FAIL) | ||||||
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# Using parametrize_with_checks | ||||||
@parametrize_with_checks( | ||||||
[MyEstimator()], | ||||||
expected_failed_checks=lambda est: CHECKS_EXPECTED_TO_FAIL | ||||||
) | ||||||
def test_with_parametrize_with_checks(estimator, check): | ||||||
check(estimator) | ||||||
``` | ||||||
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While working on the testing infrastructure, we have also been working on improving our | ||||||
tests and that means in this release we had a particularly higher number of changes in | ||||||
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Suggested change
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their names and what they do. The changes should have made it easier for developers to | ||||||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. "The changes should have" -> "The changes will make it easier for" "should have" somehow sounds like it was a failed attempt. "Increasing prices should have reduced demand for ice cream, however queues are longer than ever" |
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fix issues with their estimators. Note that you can now pass `legacy=False` to both | ||||||
`check_estimator` and `parametrize_with_checks` to include only strictly API related | ||||||
tests. | ||||||
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The above changes means developers need to update their estimators and depending on | ||||||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more.
Suggested change
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what they use, write scikit-learn version specific code to handle supporting multiple | ||||||
scikit-learn versions. To make that process easier, we've worked on a package called | ||||||
[`sklearn_compat`](https://github.com/sklearn-compat/sklearn-compat/). You can either | ||||||
depend on it as a package dependency, or vendor a single file inside your project. At | ||||||
the moment this project is in its infancy and might change in the future. But hopefully | ||||||
it helps developers out there. | ||||||
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If you think there are missing functionalities in the developer API, please let us know | ||||||
and give us feedback on our [issue tracker]( | ||||||
https://github.com/scikit-learn/scikit-learn/issues). |
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Is there an easy way to tell what is part of this developer API? If yes we could mention it here. If no, we could create it at some point later (not needed for this blog post)