Search results

simpleLoess Warning

Status: Open.

#10093 In satijalab/seurat;

· karlensberg opened on Sep 16, 2025

SCTransform not scaling all genes

Status: Open.

#10090 In satijalab/seurat;

· boazehiogu opened on Sep 15, 2025

cells.highligt highlights all spots in the selection color when none pass selection criteria

Status: Open.

#10089 In satijalab/seurat;

· satkinson0115 opened on Sep 15, 2025

FindVariableFeatures error after BPCells merging

Status: Open.

#10086 In satijalab/seurat;

· daniannr opened on Sep 12, 2025

BUG: <insert-descriptive-title>Erreur dans methods::slot(object = object, name = "layers")[[layer]][features, : nombre de dimensions incorrect

bugSomething isn't workingSomething isn't working

Status: Open.

#10081 In satijalab/seurat;

· Labyadh opened on Sep 9, 2025

BUG: seurat@meta.data loses rownames

bugSomething isn't workingSomething isn't working

Status: Open.

#10072 In satijalab/seurat;

· epartan opened on Sep 5, 2025

BUG: <FindMultiModalNeighbors: Error: std::bad_alloc>

bugSomething isn't workingSomething isn't working

Status: Open.

#10067 In satijalab/seurat;

· Thapeachydude opened on Sep 3, 2025

BUG: DimPlot fetch the wrong reduction if the object's meta.data contains the same name as the reduction

bugSomething isn't workingSomething isn't working

Status: Open.

#10061 In satijalab/seurat;

· HoangEevee opened on Aug 29, 2025

[Visium HD 3' beta support] Interactive Spatial Plots broken with segmented_outputs

Status: Open.

#10052 In satijalab/seurat;

· YoukaiFromAccounting opened on Aug 22, 2025

What is the correct approach for integrating multiple Seurat objects in v5? Unsure if there is a better way to create a single seurat object unless I merge all objects and I then integrate.

Status: Open.

#10049 In satijalab/seurat;

· SynapticPup opened on Aug 21, 2025

IntegrateData returns Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 't': subscript out of bounds

Status: Open.

#10034 In satijalab/seurat;

· mikemartinez99 opened on Aug 5, 2025

BUG: Cell order in sparse count matrix affects ScaleData() results and downstream PCA/UMAP

bugSomething isn't workingSomething isn't working

Status: Open.

#10033 In satijalab/seurat;

· JLiLab opened on Aug 4, 2025