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Added ULTIMA and ELEMENT as valid value for RG-PL according to SAM spec. (#1619)
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src/main/java/htsjdk/samtools/SAMReadGroupRecord.java

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@@ -61,13 +61,26 @@ public class SAMReadGroupRecord extends AbstractSAMHeaderRecord
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public enum PlatformValue {
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/** @deprecated Use {@linkplain PlatformValue#DNBSEQ} instead. */
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@Deprecated BGI,
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/** Capillary */
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CAPILLARY,
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/** MGI/BGI */
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DNBSEQ,
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/** Element Biosciences */
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ELEMENT,
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/** Helicos Biosciences */
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HELICOS,
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/** Illumina */
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ILLUMINA,
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/** Iontorrent */
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IONTORRENT,
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/** 454 Life Sciences */
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LS454,
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/** Oxford Nanopore */
@@ -78,7 +91,12 @@ public enum PlatformValue {
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/** Pacific Biotechnology */
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PACBIO,
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SOLID
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/** Life Technologies */
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SOLID,
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/** Ultima Genomics */
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ULTIMA
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}
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public static final Set<String> STANDARD_TAGS =

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