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DESCRIPTION
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DESCRIPTION
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Package: TDAstats
Type: Package
Title: Pipeline for Topological Data Analysis
Version: 0.4.1
Authors@R: c(
person("Raoul", "Wadhwa", email = "raoulwadhwa@gmail.com", role = c("aut", "cre")),
person("Andrew", "Dhawan", role = "aut"),
person("Drew", "Williamson", role = "aut"),
person("Jacob", "Scott", role = "aut"),
person("Jason Cory", "Brunson", role = "ctb"),
person("Shota", "Ochi", role = "ctb"))
Description: A comprehensive toolset for any
useR conducting topological data analysis, specifically via the
calculation of persistent homology in a Vietoris-Rips complex.
The tools this package currently provides can be conveniently split
into three main sections: (1) calculating persistent homology; (2)
conducting statistical inference on persistent homology calculations;
(3) visualizing persistent homology and statistical inference.
The published form of TDAstats can be found in Wadhwa et al. (2018)
<doi:10.21105/joss.00860>.
For a general background on computing persistent homology for
topological data analysis, see Otter et al. (2017)
<doi:10.1140/epjds/s13688-017-0109-5>.
To learn more about how the permutation test is used for
nonparametric statistical inference in topological data analysis,
read Robinson & Turner (2017) <doi:10.1007/s41468-017-0008-7>.
To learn more about how TDAstats calculates persistent homology,
you can visit the GitHub repository for Ripser, the software that
works behind the scenes at <https://github.com/Ripser/ripser>.
This package has been published as Wadhwa et al. (2018)
<doi:10.21105/joss.00860>.
License: GPL-3
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.3)
Imports: ggplot2 (>= 2.2.1),
Rcpp (>= 0.12.15)
URL: https://rrrlw.github.io/TDAstats
BugReports: https://github.com/rrrlw/TDAstats/issues
LinkingTo: Rcpp
RoxygenNote: 6.1.0
SystemRequirements: C++11
Suggests: testthat (>= 2.0.0),
knitr,
rmarkdown,
covr
VignetteBuilder: knitr