From b8c948c46fe0e3990c4f6a43eb47af24579cd37b Mon Sep 17 00:00:00 2001 From: Scott Chamberlain Date: Mon, 28 Sep 2020 16:28:17 -0700 Subject: [PATCH] fix #847 add epifamily rank to rank_ref_zoo dataset, bump version --- DESCRIPTION | 2 +- R/worms_downstream.R | 2 +- data/rank_ref_zoo.RData | Bin 586 -> 593 bytes inst/ignore/rank_ref_script.R | 4 ++-- 4 files changed, 4 insertions(+), 4 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index ab91f6dd..6c783a8f 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -5,7 +5,7 @@ Description: Interacts with a suite of web 'APIs' for taxonomic tasks, species names, getting taxonomic hierarchies, fetching downstream and upstream taxonomic names, getting taxonomic synonyms, converting scientific to common names and vice versa, and more. -Version: 0.9.98.91 +Version: 0.9.98.92 License: MIT + file LICENSE URL: https://docs.ropensci.org/taxize/ (website), https://github.com/ropensci/taxize (devel), diff --git a/R/worms_downstream.R b/R/worms_downstream.R index b438dc22..2f8a22e1 100644 --- a/R/worms_downstream.R +++ b/R/worms_downstream.R @@ -50,7 +50,7 @@ worms_downstream <- function(id, downto, intermediate = FALSE, start = 1, while (stop_ == "not") { iter <- iter + 1 tt <- dt2df(lapply(id, function(x) - worms_children(x, start = start, ...)), idcol = FALSE) + worms_children(x, start = start)), idcol = FALSE) tt <- prune_too_low(tt, downto, zoo = TRUE) if (NROW(tt) == 0) { diff --git a/data/rank_ref_zoo.RData b/data/rank_ref_zoo.RData index ce201c5359ae5436fa9476c68e817d060b69490e..0c3df806c6cd1224392081808395ff996a4afd77 100644 GIT binary patch literal 593 zcmV-X02kJ>O0O~Wo*(ykV%tyJ}ddbYL@2+&h6{RKVkZDoi7 zYe^j04i$UqU+f<$9mlc9=8*W!o3H1wlV3ld^6V)~k|a%T;7JDnZ&G-@0eb}Ndr9k; zXUTTYuR5 zk9_6z(xa6_-(9`IY>IG(Fb`mXaEWl`;T&V<7`s5W2p|S5kzFBNBSew;tU%}+=O{8q zkvYoAQA1t?5Mxn8zC;!^%wan5!4FGOQC_>NqS}VZ7hdmy?zy|z%v8IHna{l5N!oLy ztI!k|~}J%Fy9_g&2^GV5w@k5s9ixeblCP$smqu13hbg9sg0 z7&TO$qO6MT=~f(s)R<-3hSV^!My7F;VLOME)h=Yoq|+W6Mtf*m?IF_%4T(F&wmKTl zCT6Ve9j*BB?2534N5n98Lyd^AsIM%Cdat_9xd;#XE&9Y`(pNO8L|_yqLa>|NA8QCD74aNVpr<;2gr0TI4!>krMYwh z#-^mLODX~P+6#k80o$8DHeBd)!w6U6NHrr3)d%4>8lWypX$jvPp&KS84NmN9TX*7j zoRy>&6Z7LHZEY4H;Fgx`>fe4_(+Wmmzv2kJ>O0O<_Mu+SMYpm8zal&lUo+0eb4Czo4hRtqd_> zEr}!Bp`xe$#{QtvaU6SW4vF7;NPhl!rulQ8W!WIRfoCuTcr$?48{i`t-z!$X zz9_zX`7LFZ4L@{qvuq5{w4XDW%>ybtn$J95z+`22$u*~0WNUv6T%{bSYe6k3gH?dI-~OfVdzHD8AWFl zJy7&OiwNRe^gx%WqK5@+NqX9MrL35!{r%8w!_}*(_aOJ$eM)oPZc^p5sCSC>8tE!D zhx4)Z@khr3e;GLVX0#Rq&y!c_rpu?d_3i-7B{-c?)G?o_953HQ$~MA6W~Ah=sc-dQ YTm6C8<#PE8!$14{2PN)M=xYW50BT