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Commits on Oct 21, 2025

• Require all arguments in IBDinput_rewrite_v3.py and improve input validation

  rjbohlender

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• Refactor threadpool to use wait_for_completion for task synchronization

  rjbohlender

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• Update output file extension from .gz to .zst

  rjbohlender

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Commits on Oct 8, 2025

• Refactor LRT calculation

  rjbohlender

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Commits on Sep 30, 2025

• Merge pull request #33 from rjbohlender/ibdreuce-pheno-parse

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  rjbohlender

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• Update ibdreduce_v3.py

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  jtb324

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Commits on Sep 29, 2025

• Avoid name / type collision

  

  Ryan Bohlender

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  Ryan Bohlender

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• Merge pull request #27 from rjbohlender/add-ibdreduce-to-docker

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  rjbohlender

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• Merge pull request #28 from rjbohlender/update-readme

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  rjbohlender

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• Merge pull request #29 from rjbohlender/add-requirements

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  rjbohlender

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• Move old version to a subfolder to reduce user confusion.

  

  Ryan Bohlender

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  Ryan Bohlender

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Commits on Sep 28, 2025

• Merge pull request #32 from rjbohlender/ibdreduce-parse-pheno-refactor

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  rjbohlender

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• Update ibdreduce_v3.py

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  jtb324

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Commits on Sep 27, 2025

• uploaded the requirements.txt file

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  jtb324

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• Update README.md

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  jtb324

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• Update Dockerfile

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  jtb324

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Commits on Sep 26, 2025

• Merge pull request #26 from rjbohlender/jtb324-patch-dockerfile

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  rjbohlender

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• Update README.md

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  jtb324

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• Merge pull request #25 from rjbohlender/codex/update-ibdreduce-slice-for-permutations

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• Update Dockerfile

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  jtb324

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Commits on Sep 25, 2025

• Fix permutation column offsets and add coverage

  rjbohlender

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• Merge pull request #24 from rjbohlender/codex/refactor-fdr-block-to-reuse-empp

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  rjbohlender

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• Remove compressed sample gmap

  rjbohlender

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Commits on Sep 22, 2025

• Merge branch 'master' of github.com:rjbohlender/carvaIBD

  rjbohlender

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• Fix pad_phenotypes so that it mutates the original vector rather than a copy.

  rjbohlender

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Commits on Sep 16, 2025

• Update LICENSE

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  jtb324

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• Create LICENSE

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Commits on Jul 22, 2025

• Update ibdreduce_analysis.py

  instagrahame

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Commits on May 28, 2025

• Update README.md

  instagrahame

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• Update cmake.yml

  rjbohlender

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• Change executable to ibdmap

  rjbohlender

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• Merge remote-tracking branch 'refs/remotes/origin/master'

  rjbohlender

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• new laptop

  rjbohlender

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Commits on Apr 8, 2025

• Update README.md

  instagrahame

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Commits on Mar 27, 2025

• Add files via upload

  instagrahame

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