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package conflicts #29

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janfelix opened this issue Nov 18, 2022 · 2 comments
Closed

package conflicts #29

janfelix opened this issue Nov 18, 2022 · 2 comments

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@janfelix
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janfelix commented Nov 18, 2022

Hi,

I have been trying to install rosella through conda. Conda is updated and I created a python 3.9 environment. However, I get package conflicts such as:

Package zlib conflicts for:
rosella -> zlib[version='>=1.2.11,<1.3.0a0']
python=3.9 -> zlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0']

...and many more. Sorry, maybe this is not a rosella issue, but maybe you have an idea what it could be. Edit: This also occurred in python 3.8

Thanks!

@rhysnewell
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rhysnewell commented Nov 18, 2022

Hello!

Thanks for checking out Rosella. This kind of seems like your conda channels might be out of order. Would you please be able to post the contents of your ~/.condarc file? It should look something like this:

channels:
  - bioconda
  - conda-forge
  - defaults

Are you also creating a new conda environment for your rosella install?

@janfelix
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Hello, thanks for the fast reply.

Yes, I really could have thought of that myself, conda-forge was missing.

It worked now, thanks a lot!

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