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Passing multi_easy_bin argument for SemiBin2?

Status: Open.

#312 In rhysnewell/aviary;

· JohnYap2117 opened on May 17, 2026

Possible to use a different assembler?

Status: Open.

#311 In rhysnewell/aviary;

· demboc opened on May 11, 2026

Racon files do not exist

Status: Open.

#307 In rhysnewell/aviary;

· ronjasan opened on Apr 20, 2026

hybrid assembly stalling at polish metagenome step

Status: Open.

#297 In rhysnewell/aviary;

· Anna-MarieSeelen opened on Mar 16, 2026

FileNotFoundError: [Errno 2] No such file or directory: 'snakemake'

Status: Open.

#295 In rhysnewell/aviary;

· liaohu1231 opened on Feb 7, 2026

Issue with Checkm on Dastool

Status: Open.

#292 In rhysnewell/aviary;

· aljazdzy opened on Jan 21, 2026

Error in refine step of metabat2

Status: Open.

#289 In rhysnewell/aviary;

· katkat-ri opened on Dec 9, 2025

pixi and checkm

Status: Open.

#288 In rhysnewell/aviary;

· michoug opened on Nov 16, 2025

The semibin_bins process has stalled

Status: Open.

#287 In rhysnewell/aviary;

· haihao999 opened on Oct 15, 2025

why is the abundance after running aviary recover much lower (around half) than expected?

Status: Open.

#282 In rhysnewell/aviary;

· wallywang123 opened on Jul 16, 2025

refine_dastool is stalling in aviary recover

Status: Open.

#280 In rhysnewell/aviary;

· Anna-MarieSeelen opened on Jun 10, 2025

Issues downloading DBs for aviary

Status: Open.

#277 In rhysnewell/aviary;

· tvtv195 opened on Jun 3, 2025