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Merged
merged 190 commits into from
Oct 31, 2017
Merged

Release candidate November 1st, 2017 #2373

merged 190 commits into from
Oct 31, 2017

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josenavas
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antgonza and others added 30 commits August 28, 2017 07:55
@antgonza
replace printable for try/except utf-8
52e98a5
@antgonza
add sleeps for tests
e367b54
@antgonza
moving wait_for_prep_information_job
5f7177e
@antgonza
just leaving the changes on this pr
01da18f
@josenavas
Fixing tests
2ae9511
@josenavas
Reverting changes
2026d0c
@antgonza
dist: precise
f098fcf
@antgonza
Merge branch 'printable-to-utf8' of https://github.com/antgonza/qiita …
97a8397 
…into printable-to-utf8
@antgonza
addressing @josenavas comments
e195e07
@josenavas
Merge pull request #2255 from antgonza/printable-to-utf8
ef4f566 
replace printable for try/except utf-8
@josenavas
fix-2212
7d5da5c
@josenavas @ElDeveloper
Adding branch description to Contributing (#2256)
21f0287 
* Adding branch description

* Adding spaces

* Adding timeline
@josenavas
Merge branch 'dev' of https://github.com/biocore/qiita into dev
2e102b4
@antgonza
upgrading software
de5c89f
@antgonza
mv r_client to qiita
6248208
@antgonza
from redis import Redis
eb19870
@josenavas
Merge pull request #2261 from antgonza/upgrading-software
120e9ac 
upgrading software
@antgonza
Merge branch 'remove-moi' of https://github.com/biocore/qiita into r_…
58e2dab 
…client-to-qiita
@josenavas
Merge pull request #2262 from antgonza/r_client-to-qiita
8b4ce80 
r_client to qiita
@antgonza
rm moi and ipython
fa7cf3d
@josenavas
Move qiita_db/private.py -> qiita_ware/private_plugin.py
a47c13b
@antgonza
_system_call as system_call
c8c1b59
@antgonza
flake8
c46c05f
@antgonza
rm create_raw_data
f7e9b1e
@josenavas
Transferring VAMPS submission to internal job
c16b177
@antgonza
rm other unnecessary files
4de94cd
@antgonza
addressing @josenavas comment
f50dc35
@josenavas
Merge pull request #2263 from antgonza/rm-moi-ipython
d4f8d8c 
rm moi and ipython
@antgonza
Merge branch 'remove-moi' of https://github.com/biocore/qiita into rm…
925a3a5 
…-create_raw_data
@josenavas
Merge branch 'remove-moi' of https://github.com/biocore/qiita into tr…
58cd5ae 
…ansfer-copy-raw-data
antgonza and others added 7 commits October 23, 2017 10:55
@antgonza
addressing @ElDeveloper and @josenavas comments
1fb126d
@danteese @antgonza
Fix 2230 (#2372)
69b5645 
* fix calls to system_call and ebi submissions

* fixing errors

* fix if state == submitting:

* just raise error

* EBISubmissionError -> ComputeError

* Fix #2230 solved using modal in order to prevent large file download

* Function moved into in order to keep order. Some details fixed.
@antgonza
addressing @wasade and @ElDeveloper comments
7303611
@antgonza
fixing errors
123ef94
@antgonza
fix GUI and erros
c5db978
@antgonza
addressing @ElDeveloper comments
aa27112
@wasade
Merge pull request #2371 from antgonza/fix-1812
66e3b09 
Fix 1812
@codecov-io
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codecov-io commented Oct 24, 2017 •
edited
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Codecov Report

Merging #2373 into master will decrease coverage by 0.03%.
The diff coverage is 89.61%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #2373      +/-   ##
==========================================
- Coverage    93.8%   93.76%   -0.04%     
==========================================
  Files         163      163              
  Lines       18581    18667      +86     
==========================================
+ Hits        17430    17504      +74     
- Misses       1151     1163      +12
Impacted Files Coverage Δ
qiita_db/test/test_util.py 99.63% <ø> (ø) ⬆️
...pet/handlers/study_handlers/tests/test_artifact.py 97.19% <ø> (ø) ⬆️
qiita_pet/handlers/qiita_redbiom.py 96.05% <ø> (-0.06%) ⬇️
qiita_db/handlers/tests/test_artifact.py 97.36% <ø> (ø) ⬆️
...lers/artifact_handlers/tests/test_base_handlers.py 95.34% <ø> (ø) ⬆️
qiita_pet/test/test_download.py 94.96% <ø> (ø) ⬆️
qiita_db/handlers/processing_job.py 96.92% <ø> (ø) ⬆️
...lers/analysis_handlers/tests/test_base_handlers.py 98.78% <ø> (ø) ⬆️
qiita_pet/handlers/api_proxy/tests/test_studies.py 99.4% <ø> (ø) ⬆️
...iita_pet/handlers/api_proxy/tests/test_artifact.py 98.22% <ø> (ø) ⬆️
... and 26 more

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antgonza and others added 19 commits October 24, 2017 14:03
@antgonza
rm artifacts from parameters listing
7df64f3
@antgonza
fix flake8
18bd7b6
@josenavas
Merge pull request #2374 from antgonza/fix-study-list
fbde992 
rm artifacts from parameters listing
@antgonza
fix ilike quote params
b826546
@antgonza
addressing @josenavas comment and adding test for job without children
f0cf016
@antgonza
fix errors
bb82a65
@antgonza
addressing @josenavas comment
bee4a9b
@josenavas
Merge pull request #2375 from antgonza/fix-ilike-parameters
242741d 
Fix ILIKE parameters quoted params
@josenavas @antgonza
Fixing network labels (#2376)
0107f97 
* Fixing network labels

* Fixing error
@adswafford
Update redbiom.html
5de1b5e
@adswafford
Update redbiom.html
c9bf203
@adswafford
Update redbiom.html
d1e198e
@josenavas @antgonza
Patch 61 - transfer all parameters to str (#2379)
735bc39 
* Patch 61 - transfer all parameters to str

* Fixing errors
@antgonza
rm lower from redbiom
c678ff4
@wasade
Merge pull request #2381 from antgonza/redbiom-lower
7a0c441 
rm lower from redbiom
@antgonza
Merge branch 'redbiom-help-update' of https://github.com/biocore/qiita …
4b3f057 
…into redbiom-help-update
@antgonza
fixing smal details and adding emp_release1
6630cc9
@antgonza
fixing
ca7810e
@josenavas
Merge pull request #2382 from antgonza/redbiom-help-update
2d561f2 
Redbiom help update
@josenavas josenavas changed the title [DO NOT MERGE] Release candidate November 1st, 2017 Release candidate November 1st, 2017 Oct 31, 2017
@antgonza antgonza merged commit fabee6b into master Oct 31, 2017
@josenavas josenavas deleted the release-candidate branch November 1, 2017 14:27
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7 participants
@josenavas @codecov-io @antgonza @adswafford @ElDeveloper @wasade @danteese