@@ -54,19 +54,20 @@ def test_make_study_from_cmd(self):
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class TestImportPreprocessedData (TestCase ):
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def setUp (self ):
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self .tmpdir = mkdtemp ()
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- fd , file1 = mkstemp (dir = self .tmpdir )
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+ fd , self . file1 = mkstemp (dir = self .tmpdir )
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close (fd )
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- fd , file2 = mkstemp (dir = self .tmpdir )
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+ fd , self . file2 = mkstemp (dir = self .tmpdir )
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close (fd )
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- with open (file1 , "w" ) as f :
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+ with open (self . file1 , "w" ) as f :
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f .write ("\n " )
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- with open (file2 , "w" ) as f :
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+ with open (self . file2 , "w" ) as f :
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f .write ("\n " )
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- self .files_to_remove = [file1 , file2 ]
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+ self .files_to_remove = [self . file1 , self . file2 ]
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self .dirs_to_remove = [self .tmpdir ]
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- self .db_test_raw_dir = join (get_db_files_base_dir (), 'raw_data' )
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+ self .db_test_ppd_dir = join (get_db_files_base_dir (),
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+ 'preprocessed_data' )
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def tearDown (self ):
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for fp in self .files_to_remove :
@@ -82,6 +83,12 @@ def test_import_preprocessed_data(self):
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ppd = import_preprocessed_data (1 , self .tmpdir , 1 ,
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'preprocessed_sequence_illumina_params' ,
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1 , False )
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+ self .files_to_remove .append (
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+ join (self .db_test_ppd_dir ,
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+ '%d_%s' % (ppd .id , basename (self .file1 ))))
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+ self .files_to_remove .append (
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+ join (self .db_test_ppd_dir ,
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+ '%d_%s' % (ppd .id , basename (self .file2 ))))
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self .assertEqual (ppd .id , 3 )
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self .assertTrue (check_count ('qiita.preprocessed_data' ,
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initial_ppd_count + 1 ))
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