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q2cli

A click-based command line interface for QIIME 2.

Installation and getting help

Visit https://qiime2.org to learn more about q2cli and the QIIME 2 project.

Enabling tab completion

Bash

To enable tab completion in Bash, run the following command or add it to your .bashrc/.bash_profile:

source tab-qiime

ZSH

To enable tab completion in ZSH, run the following commands or add them to your .zshrc:

autoload -Uz compinit && compinit && autoload bashcompinit && bashcompinit && source tab-qiime