number all steps

jan-janssen · jan-janssen · commit 92ee192d3883 · 2025-05-14T00:15:21.000+02:00
diff --git a/python_workflow_definition/src/python_workflow_definition/cwl/export.py b/python_workflow_definition/src/python_workflow_definition/cwl/export.py
@@ -209,7 +209,7 @@ def _write_workflow(workflow):
                     + "_file"
                 )
         workflow_template["steps"].update(
-            {step_name_lst[ind]: {"run": node_script, "in": in_dict, "out": output}}
+            {step_name_lst[ind] + "_" + str(ind): {"run": node_script, "in": in_dict, "out": output}}
         )
     with open("workflow.cwl", "w") as f:
         dump(workflow_template, f, Dumper=Dumper)

Original file line number	Diff line number	Diff line change
`@@ -209,7 +209,7 @@ def _write_workflow(workflow):`
`209`	`209`	`+ "_file"`
`210`	`210`	`)`
`211`	`211`	`workflow_template["steps"].update(`
`212`		`- {step_name_lst[ind]: {"run": node_script, "in": in_dict, "out": output}}`
	`212`	`+ {step_name_lst[ind] + "_" + str(ind): {"run": node_script, "in": in_dict, "out": output}}`
`213`	`213`	`)`
`214`	`214`	`with open("workflow.cwl", "w") as f:`
`215`	`215`	`dump(workflow_template, f, Dumper=Dumper)`