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    18 repositories

    • MemConverter

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Feb 7, 2026Feb 7, 2026

    • FoldDoF

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 4, 2026Feb 4, 2026

    • Multisite_Calcium

      Public
      A multisite calcium ion model optimized for calcium-protein interactions in molecular dynamics simulations
      Perl
      •3•5•0•0•Updated Jan 31, 2026Jan 31, 2026

    • MCP-ANM

      Public
      MCP-ANM/mANM with PRS for membrane tension & tethering
      prsmembrane-proteinsanmmechanosensitive
      Python
      •0•1•0•0•Updated Jan 28, 2026Jan 28, 2026

    • PepMCP

      Public
      a graph-based peptide-tailored MCP predictor
      Python
      •1•0•0•0•Updated Jan 8, 2026Jan 8, 2026

    • AMPainter

      Public
      Python
      •2•5•0•0•Updated Dec 1, 2025Dec 1, 2025

    • Pore-Forming_AMP_SVM

      Public
      Python
      •0•2•0•0•Updated Dec 1, 2025Dec 1, 2025

    • ProtRAP-LM

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•5•0•0•Updated Aug 20, 2025Aug 20, 2025

    • CTGoMartini

      Public
      Jupyter Notebook
      •2•6•0•0•Updated May 13, 2025May 13, 2025

    • OVrCSU

      Public
      Python
      •0•1•0•0•Updated Apr 29, 2025Apr 29, 2025

    • CTGoMartini-tests

      Public
      Python
      •0•0•0•0•Updated Apr 15, 2025Apr 15, 2025

    • TIMOrientationAnalysis

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Nov 18, 2024Nov 18, 2024

    • SwitchingGo-Martini

      Public
      Python
      •1•3•0•0•Updated Nov 5, 2024Nov 5, 2024

    • GMX_ElectricField_Plugin

      Public
      C++
      •0•0•0•0•Updated Oct 15, 2024Oct 15, 2024

    • MCP_Predictor

      Public
      A deep learning-based predictor for membrane contact probability (MCP)
      Python
      •
      GNU General Public License v3.0
      •0•2•1•0•Updated Jul 20, 2024Jul 20, 2024

    • GromacsPlugin

      Public
      A plugin for GROMACS that adds an extra input for constant electric field in .mdp file
      C++
      •1•0•0•0•Updated Jun 20, 2024Jun 20, 2024

    • computbiophys.github.io

      Public
      HTML
      •
      MIT License
      •0•1•0•0•Updated Mar 14, 2024Mar 14, 2024

    • ProtRAP

      Public
      Predictor for lipid accessibility and solvent accessibility of proteins
      Python
      •
      GNU General Public License v3.0
      •1•4•1•0•Updated Apr 17, 2023Apr 17, 2023