new function to compute rin and threshold after setting neuron globals (

#28)

thumbnail plotting in validation (#27)

add tests for validation module (#26)

* add tests for validation module

do not use cvode for stochastic models (#24)

* do not use cvode for stochastic models

Refine SONATA output handling (#22)

* fix default spike_file

* use sonata spike_location in spikes recording

* fix data dt in write reports

* fix misleading warning

* fix unit test

* update test data

remove multiprocessing from validation functions (#23)

add tests for BPAP analysis (#21)

* add tests for BPAP analysis

Add support for compartment reports (soma + named section) as well as…

… spike reports (#18)

* add compartment report support

* update write reports

* support custom output path for reports

* update resolve_segments and get_section(s)

* add unit tests

* lint fix

* remove prints

* use default output dir and create it if missing

* Refactor compartment report logic to support arbitrary variables

* update docstring

* address review comments

* lint fix

* silence mypy warning

* fix circular import

* add spike report

* always create a spike report file even if no spikes

* minor changes + include spikes report in write_reports()

* call write_reports() inside run()

* minor update

* handle empty spike train inputs in merge_pre_spike_trains

* write 'sorting' attribute as hdf5 enum for sonata compatibility

* update unit-tests

use multiprocessing in validation and analysis for speedup (#20)

* use multiprocessing in validation and analysis for speedup

* fix tests using multiprocessing

* add NoDaemonProcess tests

---------

Co-authored-by: Aurélien <aurelien@mac.home>

Add BPAP validation (#16)

* add bpap validation and update validation output

---------

Co-authored-by: Aurélien <aurelien@MacBook-Pro-de-Aurelien.local>
Co-authored-by: Aurélien <aurelien@mac.home>