All issues

Search results

Implement CLARA on Uberon GA

Status: Open.

#3778 In obophenotype/uberon;

· dosumis opened on Sep 21, 2026

[Fix] UBERON:0003351 'pharyngeal epithelium' is chordate-restricted but generically labelled

Status: Open.

#3776 In obophenotype/uberon;

· gabdank opened on Sep 18, 2026

[NTR] cloaca outside Vertebrata, or generalise UBERON:0000162

new term request

Status: Open.

#3775 In obophenotype/uberon;

· gabdank opened on Sep 18, 2026

[NTR] respiratory tree (Holothuroidea)

new term request

Status: Open.

#3774 In obophenotype/uberon;

· gabdank opened on Sep 18, 2026

11 definitions in the 2026-06-19 release promise a part_of the axioms do not state, and 21 HPO phenotype definitions rest on those terms, and 20 automatic definitions place a metapodial element inside a digit the axioms declare disjoint from it

Status: Open.

#3773 In obophenotype/uberon;

· H0-LawJik opened on Sep 18, 2026

Missing has_part relations to CL: systematic scan of term definitions (33 evidence-backed candidates)

Status: Open.

#3769 In obophenotype/uberon;

· mellybelly opened on Sep 14, 2026

"thigh" may not be an appropriate exact synonym of hindlimb stylopod

Status: Open.

#3768 In obophenotype/uberon;

· jclerman opened on Sep 11, 2026

Definitions vs axioms in the 2026-06-19 release: a tooth both inside the head and disjoint from it, three terms whose definition and axiom disagree, and 12 candidate part_of axioms

Status: Open.

#3767 In obophenotype/uberon;

· H0-LawJik opened on Sep 11, 2026

State publicly where specimen / sample-type terms belong (organoid, cell culture, PBMC, biopsy)

Status: Open.

#3766 In obophenotype/uberon;

· mellybelly opened on Sep 7, 2026

Track Uberon/CL single-cell coverage as a recurring report

Status: Open.

#3765 In obophenotype/uberon;

· mellybelly opened on Sep 7, 2026

Create a single-cell sampling-site subset from observed usage

Status: Open.

#3764 In obophenotype/uberon;

· mellybelly opened on Sep 7, 2026

Update the code that refreshes the PORO ontology

composite

Status: Open.

#3763 In obophenotype/uberon;

· gouttegd opened on Aug 31, 2026