EFO-OBA mapping (gene expression measurement)

[ar-ibrahim]

• will map terms from oba-efo-unreviewed.dosdp.tsv
• filtered by attribute_label: gene expression

subject_id	subject_label	match_type	quality	quality_label	attribute	attribute_label
EFO:0600068	gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600070	interleukin-6 gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600069	tumor necrosis factor alpha gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600079	glucocorticoid receptor gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600070	il-6 gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600070	il6 gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600070	interleukin 6 gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600069	dif gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600069	tumor necrosis factor gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600069	tnf gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600069	tnf superfamily, member 2 gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600069	tnfa gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600069	tnf-α gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600069	tnfsf2 gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0600079	nr3c1 gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression
EFO:0020899	flg gene expression measurement	Lexical	PATO:0000001	quality	GO:0010467	gene expression

[rays22]

• I think we need a new pattern template for the traits in the table. I suggest:

'process quality' and ('characteristic of' some ('gene expression' has participant some %s))

, where %s is a gene or gene product (i.e. transcript or PR protein)

[ar-ibrahim]

I agree @rays22.