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remove escaped line breaks from example cmdline
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2 files changed

+3
-12
lines changed

2 files changed

+3
-12
lines changed

nipype/interfaces/afni/preprocess.py

Lines changed: 1 addition & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1914,9 +1914,7 @@ class ROIStats(AFNICommandBase):
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>>> roistats.inputs.stat = ['mean', 'median', 'voxels']
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>>> roistats.inputs.nomeanout = True
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>>> roistats.cmdline
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'3dROIstats -quiet -mask label-schaefer400_atlas.nii.gz \
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-nzmean -nzmedian -nzvoxels -nomeanout func.nii \
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> func_roistat.1D'
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'3dROIstats -quiet -mask label-schaefer400_atlas.nii.gz -nzmean -nzmedian -nzvoxels -nomeanout func.nii > func_roistat.1D'
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>>> res = roistats.run() # doctest: +SKIP
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"""

nipype/interfaces/afni/utils.py

Lines changed: 2 additions & 9 deletions
Original file line numberDiff line numberDiff line change
@@ -1614,12 +1614,7 @@ class Localstat(AFNICommand):
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>>> localstat.inputs.nonmask = True
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>>> localstat.inputs.outputtype = 'NIFTI_GZ'
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>>> localstat.cmdline
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"3dLocalstat -prefix bold_localstat.nii.gz \
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-mask label-WM_desc-eroded_roi.nii.gz \
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-nbhd 'SPHERE(45.0)' \
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-use_nonmask \
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-stat mean \
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bold.nii.gz"
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"3dLocalstat -prefix bold_localstat.nii.gz -mask label-WM_desc-eroded_roi.nii.gz -nbhd 'SPHERE(45.0)' -use_nonmask -stat mean bold.nii.gz"
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>>> wmlocal = localstat.run() # doctest: +SKIP
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"""
@@ -2397,9 +2392,7 @@ class ReHo(AFNICommandBase):
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>>> reho.inputs.neighborhood = 'vertices'
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>>> reho.inputs.label_set = 'power264.nii.gz'
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>>> reho.cmdline
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"3dReHo -prefix bold_reho.nii.gz \
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-nneigh 27 \
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-in_rois power264.nii.gz"
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"3dReHo -prefix bold_reho.nii.gz -nneigh 27 -in_rois power264.nii.gz"
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>>> rh = reho.run() # doctest: +SKIP
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"""

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