circle: add settings for logfiles

Author: oesteban

docker/circleci/run_examples.sh

@@ -4,9 +4,12 @@ set -x
 set -u
 
 mkdir -p /root/.nipype
+mkdir -p /scratch/logs
 echo '[logging]' > /root/.nipype/nipype.cfg
 echo 'workflow_level = DEBUG' >> /root/.nipype/nipype.cfg
 echo 'interface_level = DEBUG' >> /root/.nipype/nipype.cfg
 echo 'filemanip_level = DEBUG' >> /root/.nipype/nipype.cfg
+echo 'log_to_file = true' >> /root/.nipype/nipype.cfg
+echo 'log_directory = /scratch/logs/' >> /root/.nipype/nipype.cfg
 
 python /root/src/nipype/tools/run_examples.py $@

docker/circleci/teardown.sh

@@ -13,4 +13,4 @@ sudo mv ~/scratch/coverage.xml ~/coverage.xml
 mkdir -p ~/docs
 sudo mv ~/scratch/docs/* ~/docs/
 mkdir -p ~/logs
-sudo mv ~/scratch/logs/* ~/logs/
+sudo mv $(pwd)/scratch/logs/* ~/logs/