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14 | 14 |
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15 | 15 | import numpy as np
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16 | 16 |
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17 |
| -from .. import (Nifti1Image, Nifti1Header, Nifti1Pair, Nifti2Image, Nifti2Pair, |
18 |
| - Minc1Image, Minc2Image, Spm2AnalyzeImage, Spm99AnalyzeImage, |
19 |
| - AnalyzeImage, MGHImage, all_image_classes) |
| 17 | +from .. import (Nifti1Image, Nifti1Header, Nifti1Pair, |
| 18 | + Nifti2Image, Nifti2Header, Nifti2Pair, |
| 19 | + AnalyzeImage, AnalyzeHeader, |
| 20 | + Minc1Image, Minc2Image, |
| 21 | + Spm2AnalyzeImage, Spm99AnalyzeImage, |
| 22 | + MGHImage, all_image_classes) |
20 | 23 |
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21 | 24 | from nose.tools import assert_true, assert_equal, assert_false, assert_raises
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22 | 25 |
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23 | 26 | DATA_PATH = pjoin(dirname(__file__), 'data')
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24 | 27 |
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25 | 28 |
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| 29 | + |
| 30 | +def test_analyze_detection(): |
| 31 | + # Test detection of Analyze, Nifti1 and Nifti2 |
| 32 | + # Algorithm is as described in loadsave:which_analyze_type |
| 33 | + def wat(hdr): |
| 34 | + all_analyze_header_klasses = [Nifti1Header, Nifti2Header, |
| 35 | + AnalyzeHeader] |
| 36 | + for klass in all_analyze_header_klasses: |
| 37 | + try: |
| 38 | + if klass.is_header(hdr.binaryblock): |
| 39 | + return klass |
| 40 | + else: |
| 41 | + print('checked completed, but failed.') |
| 42 | + except ValueError as ve: |
| 43 | + print(ve) |
| 44 | + continue |
| 45 | + return None |
| 46 | + # return nils.which_analyze_type(hdr.binaryblock) |
| 47 | + |
| 48 | + n1_hdr = Nifti1Header(b'\0' * 348, check=False) |
| 49 | + n2_hdr = Nifti2Header(b'\0' * 540, check=False) |
| 50 | + assert_equal(wat(n1_hdr), None) |
| 51 | + |
| 52 | + n1_hdr['sizeof_hdr'] = 540 |
| 53 | + n2_hdr['sizeof_hdr'] = 540 |
| 54 | + assert_equal(wat(n1_hdr), None) |
| 55 | + assert_equal(wat(n1_hdr.as_byteswapped()), None) |
| 56 | + assert_equal(wat(n2_hdr), Nifti2Header) |
| 57 | + assert_equal(wat(n2_hdr.as_byteswapped()), Nifti2Header) |
| 58 | + |
| 59 | + n1_hdr['sizeof_hdr'] = 348 |
| 60 | + assert_equal(wat(n1_hdr), AnalyzeHeader) |
| 61 | + assert_equal(wat(n1_hdr.as_byteswapped()), AnalyzeHeader) |
| 62 | + |
| 63 | + n1_hdr['magic'] = b'n+1' |
| 64 | + assert_equal(wat(n1_hdr), Nifti1Header) |
| 65 | + assert_equal(wat(n1_hdr.as_byteswapped()), Nifti1Header) |
| 66 | + |
| 67 | + n1_hdr['magic'] = b'ni1' |
| 68 | + assert_equal(wat(n1_hdr), Nifti1Header) |
| 69 | + assert_equal(wat(n1_hdr.as_byteswapped()), Nifti1Header) |
| 70 | + |
| 71 | + # Doesn't matter what magic is if it's not a nifti1 magic |
| 72 | + n1_hdr['magic'] = b'ni2' |
| 73 | + assert_equal(wat(n1_hdr), AnalyzeHeader) |
| 74 | + |
| 75 | + n1_hdr['sizeof_hdr'] = 0 |
| 76 | + n1_hdr['magic'] = b'' |
| 77 | + assert_equal(wat(n1_hdr), None) |
| 78 | + |
| 79 | + n1_hdr['magic'] = 'n+1' |
| 80 | + assert_equal(wat(n1_hdr), Nifti1Header) |
| 81 | + |
| 82 | + n1_hdr['magic'] = 'ni1' |
| 83 | + assert_equal(wat(n1_hdr), Nifti1Header) |
| 84 | + |
| 85 | + |
26 | 86 | def test_sniff_and_guessed_image_type(img_klasses=all_image_classes):
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27 | 87 | """
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28 | 88 | Loop over all test cases:
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