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DOC: 5.2.0 changelog
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effigies committed Dec 11, 2023
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Expand Up @@ -25,6 +25,79 @@ Eric Larson (EL), Demian Wassermann, Stephan Gerhard and Ross Markello (RM).

References like "pr/298" refer to github pull request numbers.

5.2.0 (Monday 11 December 2023)
===============================

New feature release in the 5.2.x series.

This release requires a minimum Python of 3.8 and NumPy 1.20, and has been
tested up to Python 3.12 and NumPy 1.26.

New features
------------
* Add generic :class:`~nibabel.pointset.Pointset` and regularly spaced
:class:`~nibabel.pointset.NDGrid` data structures in preparation for coordinate
transformation and resampling (pr/1251) (CM, reviewed by Oscar Esteban)

Enhancements
------------
* Add :meth:`~nibabel.arrayproxy.ArrayProxy.copy` method to
:class:`~nibabel.arrayproxy.ArrayProxy` (pr/1255) (CM, reviewed by Paul McCarthy)
* Permit :meth:`~nibabel.xmlutils.XmlSerializable.to_xml` to pass keyword
arguments to :meth:`~xml.etree.ElementTree.ElementTree.tostring` (pr/1258)
(CM)
* Allow user expansion (e.g., ``~/...``) in strings passed to functions that
accept paths (pr/1260) (Reinder Vos de Wael, reviewed by CM)
* Expand CIFTI-2 brain structures to permit synonyms (pr/1256) (CM, reviewed
by Mathias Goncalves)
* Annotate :class:`~nibabel.spatialimages.SpatialImage` as accepting
``affine=None`` argument (pr/1253) (Blake Dewey, reviewed by CM)
* Warn on invalid MINC2 spacing declarations, treat as missing (pr/1237)
(Peter Suter, reviewed by CM)
* Refactor :func:`~nibabel.nicom.utils.find_private_element` for improved
readability and maintainability (pr/1228) (MB, reviewed by CM)

Bug fixes
---------
* Resolve test failure related to randomly generated invalid case (pr/1221) (CM)

Documentation
-------------
* Remove references to NiPy data packages from documentation (pr/1275)
(Dimitri Papadopoulos, reviewed by CM, MB)

Maintenance
-----------
* Quality of life improvements for CI, including color output and OIDC publishing
(pr/1282) (CM)
* Patch for NumPy 2.0 pre-release compatibility (pr/1250) (Mathieu
Scheltienne and EL, reviewed by CM)
* Add spellchecking to tox, CI and pre-commit (pr/1266) (CM)
* Add py312-dev-x64 environment to Tox to test NumPy 2.0 pre-release
compatibility (pr/1267) (CM, reviewed by EL)
* Resurrect tox configuration to cover development workflows and CI checks
(pr/1262) (CM)
* Updates for Python 3.12 support (pr/1247, pr/1261, pr/1273) (CM)
* Remove uses of deprecated ``numpy.compat.py3k`` module (pr/1243) (Eric
Larson, reviewed by CM)
* Various fixes for typos and style issues detected by Codespell, pyupgrade and
refurb (pr/1263, pr/1269, pr/1270, pr/1271, pr/1276) (Dimitri Papadopoulos,
reviewed by CM)
* Use stable argsorts in PARREC tests to ensure consistent behavior on systems
with AVX512 SIMD instructions and numpy 1.25 (pr/1234) (CM)
* Resolve CodeCov submission failures (pr/1224) (CM)
* Link to logo with full URL to avoid broken links in PyPI (pr/1218) (CM,
reviewed by Zvi Baratz)

API changes and deprecations
----------------------------
* The :mod:`nibabel.pydicom_compat` module is deprecated and will be removed
in NiBabel 7.0. (pr/1280)
* The :func:`~nibabel.casting.int_to_float` and :func:`~nibabel.casting.as_int`
functions are no longer needed to work around NumPy deficiencies and have been
deprecated (pr/1272) (CM, reviewed by EL)


5.1.0 (Monday 3 April 2023)
===========================

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