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STY: Remove blank lines from test_freesurfer_ico7_hack
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nibabel/tests/test_nifti1.py

Lines changed: 1 addition & 10 deletions
Original file line numberDiff line numberDiff line change
@@ -295,36 +295,27 @@ def test_freesurfer_large_vector_hack(self):
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def test_freesurfer_ico7_hack(self):
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HC = self.header_class
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hdr = HC()
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# Test that using ico7 shape automatically uses factored dimensions
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hdr.set_data_shape((163842, 1, 1))
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assert_array_equal(hdr._structarr['dim'][1:4], np.array([27307, 1, 6]))
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# Test consistency of data in .mgh and mri_convert produced .nii
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nib_data = get_nibabel_data()
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nitest_path = os.path.join(nib_data, 'nitest-freesurfer')
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nitest_path = os.path.join(get_nibabel_data(), 'nitest-freesurfer')
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mgh = mghload(os.path.join(nitest_path, 'fsaverage', 'surf',
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'lh.orig.avg.area.mgh'))
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nii = load(os.path.join(nitest_path, 'derivative', 'fsaverage', 'surf',
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'lh.orig.avg.area.nii'))
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assert_equal(mgh.shape, nii.shape)
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assert_array_equal(mgh.get_data(), nii.get_data())
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assert_array_equal(nii.header._structarr['dim'][1:4],
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np.array([27307, 1, 6]))
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# Test writing produces consistent nii files
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with InTemporaryDirectory():
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nii.to_filename('test.nii')
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nii2 = load('test.nii')
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assert_equal(nii.shape, nii2.shape)
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assert_array_equal(nii.get_data(), nii2.get_data())
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assert_array_equal(nii.get_affine(), nii2.get_affine())
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def test_qform_sform(self):
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HC = self.header_class
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hdr = HC()

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