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readme.txt
@@ -3,11 +3,14 @@ Summary:
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fast, and can be useful in a variety of situations. You can use it to
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extract sequences from one fasta/fastq file into a new file, given
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either a list of header ids to include / exclude or a size minimum /
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- maximum.
+ maximum sequence lengths.
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Additionally, it can convert from fastq to fasta or visa-versa and
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can change the length of the output sequence lines.
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+ NOTE: pullseq prints to standard out, so you need to use redirection
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+ (>) to create outpus files.
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+
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Synopsis:
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# general extraction with a list of names
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pullseq --input=<input fasta/fastq file> --names=<fasta header ids file>
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